Chryseobacterium sp.: F7R58_04245
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Entry
F7R58_04245 CDS
T09035
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
chra
Chryseobacterium sp.
Pathway
chra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F7R58_04245 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chra03019
]
F7R58_04245 (recQ)
03400 DNA repair and recombination proteins [BR:
chra03400
]
F7R58_04245 (recQ)
Enzymes [BR:
chra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F7R58_04245 (recQ)
Messenger RNA biogenesis [BR:
chra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F7R58_04245 (recQ)
DNA repair and recombination proteins [BR:
chra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F7R58_04245 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ-1-like_HTH
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
QFG52787
UniProt:
A0A5P5ZMA8
LinkDB
All DBs
Position
893869..896073
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AA seq
734 aa
AA seq
DB search
MKITSAELTGELKKYFGFSKFKGQQKEIITTLLGGNDVFVLMPTGGGKSLCYQLPALISE
GTAIVVSPLIALMKNQVDAVNGLSSDPGVAHVLNSSLNKTQTKQVFDDITAGRTKLLYVA
PESLIKEEYLDFLKEVKISFVAIDEAHCISEWGHDFRPEYRNLKLIIDKVADVPVIALTA
TATPKVQDDIQKTLGMTDAKVFKESFNRPNLFYEVRPKVNIDKEIVRFINQHKGKSGIVY
CLSRRKVEEFAQLLQVNGINALPYHAGLDQKTRVANQDKFLMEEADVIVATIAFGMGIDK
PDVRFVIHYDIPKSLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKPVSEREI
GLQLLNEVVGYVETSMSRRQYILHYFGEKFDPVKGEGAQMCDNSVNPPKLVDATAELKMV
LEMVKELDEKFKTKDLISVIVGKENSVTKSYKLESGRHFGMGRDKPENFWKSIIRQATVQ
NYLQKDIETYGVLKVTEKGSNVISGKDTEAFQIAEDRQYDLAQTKANSDQMQGQQGGGLD
QNLFAQLKDLRKKVAKKHGIPPYTVFMDPSLEDMTVQYPIKIEEIGKIYGVGEGKARKYG
KEFAEFISRYVEENNIERTQDMVIKQVANKSSHKVFIIQSTDKKIDLEDIAKAKNLSMHD
LLKEMESIVYQGTKLKIDYYIDENFDEDIVEEFMDFMKGSESDSMKVLLNEFGDDLSDDE
VRMLRIKFISDVAN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataacttccgccgaactaacaggcgaacttaaaaaatatttcggattttcaaaa
ttcaaaggtcagcagaaagaaatcatcactaccctgctgggaggcaatgatgtttttgtg
cttatgcctacgggtggcggaaaatccctttgctaccagttgcccgcccttatttcggag
ggaaccgcaatcgtagtctcaccgctgatcgccctgatgaaaaatcaggtagatgccgtg
aacggcctctcctcggatcccggcgtagcccatgtcctgaactcatcgcttaacaagacc
caaaccaagcaggttttcgacgatattaccgcaggacgaaccaaattattatatgttgcc
cccgaatcactcatcaaggaagagtatcttgactttctgaaggaggttaagatttccttt
gtagccattgacgaggcgcactgtatttccgagtggggccatgatttccgcccggaatac
cgcaatctgaagctgatcattgacaaagttgccgatgttcccgtaattgcgcttaccgct
actgctacacctaaggtgcaggacgatattcagaaaacacttggaatgaccgatgcgaaa
gtgtttaaggaaagttttaaccggcctaaccttttttatgaagtacgcccgaaggtcaac
attgacaaggaaattgtccgcttcataaatcagcataaagggaagtccggaattgtgtac
tgcctgagccgccggaaggtagaagagtttgctcagctgctgcaggtgaacggaatcaac
gcactgccttatcatgcgggtctggaccagaaaaccagggtagccaatcaggataagttc
ctgatggaggaggctgatgtaattgtggctaccatcgctttcggtatgggtattgacaag
ccggatgtacgatttgttattcactatgatattccaaaatccctggagagttattaccag
gagaccggccgtgccggcagggatggtggcgagggtcactgcctggctttctacgatccc
aaagacattgagaagctggaaaagttcctggcccaaaaacctgtctcagagcgcgaaatt
ggcctgcagctgctgaacgaagtggtgggttatgtggaaacctccatgagccgccgccag
tacatactgcattatttcggcgaaaagtttgatcctgtaaagggcgagggagcgcaaatg
tgcgacaactctgtaaatccacccaagttggtggatgctacggccgagctgaagatggtc
ctggagatggtgaaagagctggatgaaaaatttaaaactaaagacctcatctcggtgatt
gtcggtaaagaaaattctgttaccaaatcttataaactggaatccggaagacatttcggc
atgggcagggataaacctgagaatttctggaaatcaattatccgtcaggctaccgttcag
aattatctccaaaaagacattgagacctacggggttcttaaggttaccgaaaaaggttcg
aatgtaatttcagggaaagatactgaagctttccaaattgccgaagacaggcagtacgat
cttgcacagactaaggccaattcagaccaaatgcagggtcagcagggtggtggactggat
caaaacctgtttgcgcaactgaaagatcttcgtaaaaaggtggctaaaaaacacggaatt
ccgccttacacggtgttcatggatcccagtctggaagatatgactgttcagtatccgatt
aagattgaggaaatcggtaagatttatggcgtaggcgagggcaaggccagaaaatacggt
aaggaattcgctgaattcatcagcaggtatgtagaggaaaacaatattgaacgtacacag
gacatggttatcaagcaggtggcaaacaagtcatcccacaaggtgttcatcatccagagt
accgataagaaaattgacctggaagacattgccaaagcgaagaacctcagtatgcacgac
ctccttaaggaaatggaaagtattgtatatcagggtaccaaacttaagattgactattac
atcgatgagaattttgatgaggatattgtagaggaattcatggactttatgaaaggctcc
gaaagtgacagtatgaaagtattgctcaatgaatttggtgacgaccttagtgatgatgag
gttcgtatgctccgtatcaaatttatttcggatgtagccaattaa
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