Chryseobacterium sp.: F7R58_04870
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Entry
F7R58_04870 CDS
T09035
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
chra
Chryseobacterium sp.
Pathway
chra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F7R58_04870 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chra03019
]
F7R58_04870 (rny)
Messenger RNA biogenesis [BR:
chra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
F7R58_04870 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF6286
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QFG52905
UniProt:
A0A5P5ZMN2
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All DBs
Position
1034897..1036468
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AA seq
523 aa
AA seq
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MTTTVIIVGILALVIGAVLGMVFSRSSLNTKARFILEDAKKNAENVIETANVKAEAVRKD
KESQAKVKFLELKSQHDSEIQSREKKMQDAEKRIRDKEQKLNDELSKTGKLEKDLDRQIA
DYAKKHEILEKKQQDLDAVIAQKVEILEKIANYSAEDAKAELVEAMKAEAKSRAQAHVQS
IMEEAQLNAKQEARKIVIQTIQRIGTEQAIENSVSVFNIESDEIKGRIIGREGRNIRALE
AATGVEIIVDDTPEAILLSCFDPVRREIARLSLHRLVTDGRIHPARIEEVVEKTKKMIEE
EIIEVGKRTIMDLGIHGLHPELVKIVGRMKFRSSYGQNLLQHSREVANIAATMAAELGLN
VKMAKRAGLLHDIGKVPEQESELPHALLGMQWAEKYGENAEVVNAIGAHHDEVEMTSLLS
PIIQVADAISGARPGARRQVLESYIQRLKDLEAAAMSFDGVSSAYAIQAGRELRVMVESS
KVNDDQSSQLSYDISEKIQNELTYPGQVRVTVIRETRSVNIAR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaactgttattatcgtaggcattctcgcactggtcattggggctgtgctgggt
atggttttttcccgaagttcactgaacaccaaagccaggttcattctggaagatgcaaag
aagaatgccgaaaacgttatagaaactgctaatgtgaaagccgaagcagtacgcaaagac
aaggaatctcaggcaaaagttaaattccttgagttgaaatcgcagcacgattctgagatc
cagagccgtgaaaagaagatgcaggatgccgagaaaagaatccgcgacaaagagcaaaaa
ctgaatgatgaactcagcaagacaggaaaacttgaaaaagacctggacagacagattgct
gattatgcgaaaaagcacgaaatcctggaaaagaaacaacaggatcttgatgcagtgatc
gctcagaaagtagaaatcctcgagaaaattgccaattacagtgccgaagacgcaaaagct
gaactggtggaagcgatgaaggccgaagccaaaagccgtgcgcaggctcacgtacagagc
atcatggaagaagcgcagcttaacgccaagcaggaagccagaaaaattgtcattcaaacg
atacagcgtatcggtacggaacaggccatagagaattctgtatctgtctttaatattgag
tcagacgagatcaagggacgcattatcggtagggaaggacgtaatatccgtgcccttgaa
gctgcaactggagttgaaattattgttgacgacactcccgaagcaatcctgctctcctgt
tttgatccggttaggcgtgaaatcgcaagactgtctctgcacagacttgtaacagacggc
agaattcacccggcaagaattgaagaagtggttgaaaagaccaagaaaatgatcgaagag
gagatcattgaagtaggtaagcggactattatggaccttggaatccacggactgcatcct
gaattggttaaaatcgtaggacgtatgaaattcaggtcttcctatggccagaaccttctt
cagcactcccgtgaagtggccaatattgcggcaacaatggctgcagagcttggcctgaat
gtaaagatggctaaaagagcagggttactgcacgatataggaaaggtgccggagcaggaa
tccgagcttccacacgcactgttaggaatgcagtgggctgagaaatatggtgaaaatgca
gaggtagtgaatgctatcggtgcgcaccacgacgaagtagagatgacttcactactgtcg
ccaatcatccaggtggctgatgcgatttcaggtgccagaccgggcgccagacgtcaggtg
ctggagtcctacatccagcgtttaaaagaccttgaagctgcagctatgagctttgacggt
gtttccagcgcgtacgccatccaggctggacgtgaacttcgggtaatggtagaaagcagc
aaggtgaatgacgatcagtcctcacagctgtcttacgacatctccgaaaagatccagaac
gaacttacctatcctggtcaggtacgggtaaccgtaatccgcgaaacgagatccgtgaat
attgcgagataa
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