Chryseobacterium sp.: F7R58_05065
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Entry
F7R58_05065 CDS
T09035
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
chra
Chryseobacterium sp.
Pathway
chra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
chra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F7R58_05065 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chra03400
]
F7R58_05065 (uvrA)
DNA repair and recombination proteins [BR:
chra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F7R58_05065 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F7R58_05065 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
nSTAND1
AAA_16
AAA_29
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND3
AAA_15
AAA_21
AAA_25
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
QFG52944
UniProt:
A0A5P5ZN90
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All DBs
Position
1073053..1075884
Genome browser
AA seq
943 aa
AA seq
DB search
MSEKKEYIEIYGAREHNLKDIDVRIPRNELVVITGLSGSGKSSLAFDTIFAEGQRRYIET
FSAYARQFLGGLERPDVDKIEGLSPVIAIEQKTTNKNPRSTVGTVTELYDFLRLLFARVS
DAYSLTSGRKLVSYTEEQILETIKENYQGEKILLLAPVVRSRKGHYHELFVQMARKGYSQ
ARIDGVLQDLEYDLKLDRYKTHDIDIVIDRWIIGEKATEGRMEKSLRTALDMGEGVIGIQ
KLGGSDIQYFSKNLMDDDSGQSLALPEPNTFSFNSPKGSCPNCKGLGVINKINTDYFVEN
PKLSIGQGALLPLEDIKNNKWVLAQLKNILEISNLSLTTPFRDIPSEVVDFMYFGMSREI
SKDLKYAGISKKIKVNFEGLVAYIQDIINDKESYDAVLLERHFTTEEICPKCNGTRLQPE
SLSFKIDGSHIAEISALSLSEFKEWLAQVKPKFSSKNALIANEILKEIETRLQFLLDMGL
DYLSLSRSSRTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNERLINSLKNLR
DIGNSVLVVEHDKDMILGADHVLDIGPRAGKFGGEVLWQGHPDDLLKADTVTADYMTGKR
QIEIPAQRRSGNGKSIVLKGATGNNLKNVTLEIPLGKLVVVTGISGSGKSSLINGTLYPI
LNRHFYRSVQEPLPYKKIEGIEHIDKIVDVDQTPIGRTPRSNPATYTGMFTDIRNLFSEL
PESKIRGYKPGRFSFNVKGGRCETCQGGGLKVIEMNFLPDVYVHCETCNGKRFNRETLEV
RYKGKSISDVLEMTIDEAVDFFAPIPRIFSKVKTLQDVGLGYITLGQQSTTVSGGEAQRI
KLATELAKRQTGNTLYILDEPTTGLHFEDVKVLMDAINRLVDLGNSFIIIEHNMDVIKLA
DHMIDIGPEGGKHGGKIVAKGTPEEVIKNSKSLTGKFLRKELN
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaagaaagaatatatagaaatttacggggcacgggaacacaacttaaaggac
attgatgtccgcatcccgcgtaacgaacttgtagtgattacaggtttatccggcagcgga
aaatcttccctggcatttgatactatttttgccgaaggccagcgccgctacattgagacc
ttttcggcctatgcccggcagttcctgggtggactggaaagaccggatgtggataagatt
gaaggactgtctccggtgatcgctatagaacagaaaacaacaaataaaaatccgcgttcc
accgtaggtacggtaaccgaactttatgatttcctccgacttctgtttgccagggtttcc
gacgcctattccctgacgtcgggccgaaaactggtaagttataccgaagagcagatcctg
gaaaccattaaagaaaattatcagggcgaaaaaatattgttattggccccggttgtgcgc
tcccgaaaaggacactatcatgaactgtttgtacagatggcgcgcaaagggtacagtcag
gcacgtattgacggtgtcctgcaggatctggagtatgacctgaaactggacaggtacaaa
acgcatgatatcgatattgtaattgaccgctggatcattggcgaaaaagcaactgaaggg
cgaatggagaaatcgcttcgtacggctctggatatgggtgagggcgttatcggaatccag
aaacttggcggcagtgacattcagtatttttcaaaaaacctgatggacgatgattccggg
caatcgctggctttaccggaacctaacacattttcattcaactcccccaaaggtagctgc
cccaactgtaagggacttggggtcatcaataagattaacacggattattttgttgaaaat
cctaagttgtcaatcggtcagggagcacttctgccgctggaggatatcaaaaacaataaa
tgggtactcgctcaactgaagaatatcctcgaaatttcaaatctgtcactcaccacacct
ttcagggatattccatcggaggtggtggattttatgtatttcgggatgtcccgcgaaata
agtaaggatcttaagtatgcaggaatctccaagaagatcaaggtgaattttgaaggtctg
gtggcatatattcaggatattatcaatgacaaagaaagttatgacgcggtgttgctggaa
aggcattttacaaccgaagaaatttgtcctaaatgtaacggaacccggctgcagcccgaa
agcctgagctttaaaatagatggcagtcacattgccgaaatcagtgccctttcgctttca
gagtttaaggaatggctggctcaggtgaaaccgaaattttcaagcaaaaatgccctgatc
gccaatgaaatactgaaggaaattgaaacccgtctgcagttccttctggatatgggactg
gactatctgagtctgagccgcagttcgcgtacgctgtccggtggcgaaagtcagcggatc
cgcctggctacacagatcggttcacagttggttaatgtgctttacattctggatgaaccc
tctattggtcttcatcagcgtgataatgaaagacttattaattcactgaagaacctgcgg
gatatcggtaattccgttttggtagttgaacatgacaaagatatgatcctgggagcagac
catgtgctggatatcggcccccgcgccgggaagtttggtggcgaagttttatggcaggga
catccggacgatctgctgaaagccgatactgtaaccgcggattacatgaccggtaaaagg
cagattgaaattcctgctcaaaggcggtcaggcaacgggaaaagcattgtcctgaaaggt
gcgacaggaaacaacctgaagaatgtaaccctggaaattccactgggaaaactcgtggtg
gtgactggaatttccggtagtggaaaatcttcactgatcaacggtacactgtatcccatc
ctcaatcgtcatttctaccgcagcgtgcaggaacctttgccttataaaaagattgaaggc
atcgaacatatagataagattgtagatgtagaccaaacccccatcgggcggacaccaaga
tccaatcctgccacctataccggtatgtttactgatatcagaaacctgttctctgaattg
ccggagagtaaaatccgcggctataaaccaggcagattttccttcaatgtgaaaggtggg
cgctgtgagacttgtcagggaggtggtctcaaagtgattgagatgaatttcctgcctgat
gtgtacgtgcactgcgaaacctgcaacggcaaaagatttaaccgcgaaacgctggaagtg
cgttacaaaggaaaatcaatttcggatgtgctggagatgacaattgatgaagcagtagat
ttctttgctcctattccccggattttcagcaaggtgaaaacactccaggatgtggggtta
ggttatatcactctggggcagcagtccacaacggtgtcgggtggtgaagcccagcgtatt
aaacttgccacggaacttgcaaaacgccagaccggcaatacgctgtatattctggatgaa
cctactacaggccttcactttgaggatgttaaagtgcttatggatgccattaacagactt
gtagaccttggtaattccttcatcataatcgagcataatatggatgtcatcaagctggca
gaccatatgattgacattggtcctgaaggcggtaagcatggcggaaagattgtagctaaa
ggtacaccggaggaggtgatcaaaaactcaaaatcgctgaccggaaaatttttacgtaag
gaacttaattaa
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