Chryseobacterium sp.: F7R58_05485
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Entry
F7R58_05485 CDS
T09035
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chra
Chryseobacterium sp.
Brite
KEGG Orthology (KO) [BR:
chra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chra03032
]
F7R58_05485
03400 DNA repair and recombination proteins [BR:
chra03400
]
F7R58_05485
Enzymes [BR:
chra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
F7R58_05485
DNA replication proteins [BR:
chra03032
]
Prokaryotic type
DNA Topoisomerases
F7R58_05485
DNA repair and recombination proteins [BR:
chra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F7R58_05485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QFG53021
UniProt:
A0A5P5ZQT1
LinkDB
All DBs
Position
complement(1155817..1156932)
Genome browser
AA seq
371 aa
AA seq
DB search
MKTEISELEAVSRISPSKIVKIMKDPVKSAKAVQLVYTTDRESEGIERRLWGKKFRYFKG
DEKIKDPEQIQRINKLAIPPAWENVWICALENGHLQATGVDAKQRKQYRYHPVWTALRNH
TKFYRMLQFGYALPKIRLQLEKDLAIRKLEKRKVLAVVVSLMERTNIRIGNNVYEKLYGS
FGLTTLKDKHVNVKGQKISFSFKGKKGVYHDIDLKNSRLAKAVQNCRDIPGKELFQYYDE
HGQRHPVDSGMVNEYIKEISGDDFTAKDFRTWSGTVNALIAFREIGEAESNSDYKSKVKE
ALEMVAASLGNTPAVCRKYYVHPLVINLYENNSIKKYLDELDAIEINDGKSGLTKEEMIV
MKMLENEKLKH
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagaaatttccgaacttgaggcagtaagcaggatcagtccctccaaaatcgta
aagatcatgaaggatcccgttaaatctgcaaaagcggtccaattggtttataccaccgac
cgggaatcggaagggatagaacgccggctctggggcaaaaaattccgttattttaaagga
gatgaaaagataaaggacccggaacaaatccagcggattaacaaattagccataccgcca
gcctgggagaatgtatggatttgcgccctggaaaacggacacttacaggcaacaggtgta
gatgcgaaacaacgcaaacagtaccgttaccaccccgtctggacagcgcttcggaaccat
actaagttttacaggatgctgcagtttggttatgcgttgcccaaaatcaggcttcagctg
gaaaaagatttggctatccgcaagctggagaaaagaaaagtcctagctgttgtggtgagc
ttaatggagcgaactaatatcagaattgggaataatgtatatgaaaaactttacggctcc
tttggtctaaccaccctaaaggacaagcatgtaaatgttaaaggccagaaaatcagcttt
tcattcaaagggaagaaaggcgtatatcatgatatcgaccttaaaaattcacgtctggcg
aaggctgttcagaactgccgtgacatcccgggaaaagaactgttccaatactatgatgaa
catggacagcgacatccggtagattcaggaatggttaatgagtatataaaggaaatcagt
ggcgatgatttcacagcaaaggatttccgtacctggtccggaacggtaaacgcactgatt
gccttcagggaaattggtgaagccgaaagcaattcggactataaatcaaaagtaaaggag
gccctggagatggtggcagcctctcttggcaatacgcctgctgtctgcaggaaatattat
gttcatccgctggtcatcaatctttatgaaaacaattccataaaaaaatatctggatgaa
ttggatgcgattgaaatcaacgacggaaagtcaggacttacaaaagaggaaatgatagtg
atgaaaatgctggaaaatgaaaaattaaaacattaa
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