Chryseobacterium sp.: F7R58_08310
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Entry
F7R58_08310 CDS
T09035
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
chra
Chryseobacterium sp.
Pathway
chra02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
chra00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
F7R58_08310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chra03021
]
F7R58_08310
Transcription machinery [BR:
chra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F7R58_08310
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Sigma70_r4_2
DUF6285
DUF7443
Motif
Other DBs
NCBI-ProteinID:
QFG53551
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All DBs
Position
1784134..1785000
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AA seq
288 aa
AA seq
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MRQLKITKQVTNRETASLDKYLQEIGKVELITADEEVDLAQKIRAGDRAALEKLIKANLR
FVVSVSKQYQNQGLSLPDLINEGNLGLMKAAKRYDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKAYAHLEQENERPPSPEELAEVLDMSEEDIKESMKNSGRHL
SMDAPLVEGEDSNLYDVLRSGESPSPDKDLMLESLQIEIERALQTLTPREADLVRLYFGL
NGKHPMTLEEIGETFDLTRERVRQIKEKAIKRLKHNTRSKILKSYLGK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagacagttaaaaattaccaagcaggttaccaacagggaaaccgcgtcactggacaag
tatcttcaggaaatcggaaaagtggaactgattaccgccgacgaagaggttgatttagca
caaaagatccgcgccggcgaccgcgccgcactggaaaaactcattaaagccaaccttcgt
ttcgtggtatctgtttccaagcagtaccaaaatcagggactgtcccttcccgaccttatc
aatgaaggtaatttgggactgatgaaggccgccaaaaggtacgatgaaaccagaggtttt
aaatttatttcgtacgcggtatggtggatcagacagtccatcctgcaggcgctggcagag
cagtccaggattgtgaggctaccactgaacaagattggctccatcaacaaaatcaacaag
gcttacgctcacctggagcaggaaaacgaaagacctccatccccggaagaactggctgaa
gtactggatatgagcgaggaagacatcaaggaatccatgaaaaacagcggaagacacctt
tctatggatgcaccgcttgtagaaggtgaagattccaacctttatgatgtactgcgctcc
ggtgaatcaccaagtcccgacaaagacctgatgctggaatccctgcagattgagattgaa
agagccctgcaaacacttaccccaagggaagcagaccttgtacgtctttattttggcctg
aacggcaaacacccgatgactctggaagaaattggcgaaaccttcgaccttaccagagag
agagtgcgtcagatcaaggaaaaagccatcaagagacttaagcacaataccagaagtaag
atcctgaaatcttatctgggcaaataa
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