Chryseobacterium sp.: F7R58_11465
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Entry
F7R58_11465 CDS
T09035
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chra
Chryseobacterium sp.
Brite
KEGG Orthology (KO) [BR:
chra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chra03032
]
F7R58_11465 (topA)
03400 DNA repair and recombination proteins [BR:
chra03400
]
F7R58_11465 (topA)
Enzymes [BR:
chra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
F7R58_11465 (topA)
DNA replication proteins [BR:
chra03032
]
Prokaryotic type
DNA Topoisomerases
F7R58_11465 (topA)
DNA repair and recombination proteins [BR:
chra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F7R58_11465 (topA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QFG54133
UniProt:
A0A5P5ZRQ1
LinkDB
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Position
complement(2448412..2450985)
Genome browser
AA seq
857 aa
AA seq
DB search
MPKNLVIVESPAKAKTIQKYLGKDFEVKSSFGHIRDLPKKGMGIDLTTFTPDYEVSADKK
KIVSKLKDAVKKADTVWLASDEDREGEAIAWHLAQELKLKDDNTKRIVFHEITKNAILKA
MENPRSIDQNLVNAQQARRVLDRIVGFEMSPVLWKKVKTGLSAGRVQSVAVRLVVERELE
IRNFVPKSSFRVEGAFLNSEKQLIAAKVKKDFAEGQDAENFLTLAKDTEFTVLNVEKKPG
TRTASAPFTTSTLQQEASNRLGYGVTSTMRVAQRLYEEGFITYMRTDSVSLSQEAINGAK
AQILSEYGEEYSQPRNYTTKSASAQEAHEAIRPTDFSVKSVGDAQLNRLYQLIYKRTLAS
QMANAKIEKTVIEIGSPKLPQHFEAQGEVIVFDGFLKAYGITKTDEDEEENNEKILPKVS
VGEALSYKKIEATEKFTKPAARYTEAGLVKKLEELGIGRPSTYAPTIQTIQNRAYVDKRE
IEPQEREIMKMSLTKSGLKKEVLTEKFGGDKNKFVPTDIGEVVNDFLTQNFAEILDYGFT
AKVEQDFDDIANGSEKWKEILQGFYSDFHPRIEDVEENADRANGERILGTDPKSGKNVIA
RIGRFGPMVQIGEQDDEEKPVFASLMASQNIATITLEEALELFRLPFDLQEYEGQPVSVG
VGRFGPYVKWGETFISIPRGEDPLSVTQERAEEIIREKQIADAPVATYKGEGVTKGTGRF
GPFIKYKSLFINVPKRYDFDNLTQEEMHELIEAKLEKEANRYIRQWEDEKISIENGRWGP
FIKFGKKMFKIPKTKKDEKYTAEELAGVSLDEVKKWITAQDKDAFKEKPKKAAVKKTAVK
KPAAKKTTAKKPAAKKK
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaaatttagtgattgtggaatcacctgcaaaagcaaagaccattcagaagtac
cttgggaaagattttgaggtgaaatccagtttcggtcatatccgcgacctgcctaaaaag
gggatggggattgacctcactacgtttactcccgattacgaagtttcggcagataagaaa
aagatagtttctaaactcaaagatgcagtgaagaaggcggataccgtatggctggcttcc
gatgaagaccgtgaaggtgaggccattgcctggcacctggcccaggaactgaaattgaag
gatgacaatacaaaacgtattgtttttcacgaaattacaaagaatgcaatcctgaaagcc
atggagaatccgaggtctattgaccaaaaccttgtaaacgcccagcaggcgcgaagggtt
ctggaccggattgtaggttttgaaatgtctccggtactttggaagaaagtgaagaccgga
ctttcagccggtcgtgtacagtcggtagctgtccgtttggttgtggaaagggaacttgaa
atcaggaactttgtgcctaaatcaagttttcgggtagagggtgctttcctgaacagtgaa
aagcaacttattgcagctaaagtgaagaaggattttgcagaagggcaggatgccgaaaat
tttctcacccttgcaaaagatacagaattcacggtgcttaatgtggaaaagaaaccgggc
acacgtacggcctcagcaccttttacaacatccactttacagcaggaagccagtaaccgt
ctcggttatggcgtgacctctaccatgagagtggcacagcgactttacgaagaaggtttc
atcacctatatgcgtaccgactcggtaagtctgtcccaggaagcaatcaatggtgcgaaa
gcacagattttatctgaatatggtgaagaatattcccagccgcgcaattatacaaccaaa
tccgcatcggctcaggaagctcacgaagccatacgtcccacagacttttctgtgaagtca
gttggcgatgcacagcttaacaggctttaccagcttatatataaaaggacgctggccagc
cagatggcaaatgccaaaattgagaagaccgtaattgaaattggaagtccaaaattgcct
cagcattttgaggcgcagggtgaagttatcgtttttgacggctttctgaaggcttacgga
attaccaaaactgatgaagatgaggaggaaaacaatgaaaaaattcttccgaaagtaagc
gtaggtgaggcattgagctataaaaagattgaagccaccgaaaaattcacaaaacctgca
gcccgttatacagaagccggcctggtgaaaaaactggaagagttgggcataggccgacct
tctacctacgcaccgacgatacaaaccatacagaaccgtgcttatgtagataaaagagaa
attgaacctcaggaaagggagattatgaaaatgtctctaaccaaatccgggctcaaaaag
gaagttctaacagagaagttcggcggtgacaaaaataaattcgtacctactgatattggt
gaagtggtaaatgatttcctgacgcagaacttcgccgagatcctggattacggttttacc
gccaaggtggagcaggattttgatgatattgccaacggttcggaaaagtggaaggagata
ctgcagggcttctacagcgatttccatccgcggattgaggatgtggaggaaaatgccgac
cgtgcaaacggagaacgcattcttggaacagatccgaaaagcggtaaaaacgtcattgcc
agaatcggcagattcggtccaatggtgcagatcggtgagcaggatgatgaggaaaaaccg
gttttcgccagcctcatggcctctcagaatatcgcgacaattacgcttgaagaggctctg
gagcttttcagactgccttttgaccttcaggaatacgagggacaaccggtttcggtagga
gtaggccgttttggtccctatgtaaaatggggtgagaccttcatcagtattccgcgtggc
gaagaccctctttctgtaactcaggaacgtgctgaggaaatcatccgcgagaaacagatt
gctgatgcacctgtggctacctataaaggtgaaggagtgacaaaaggaaccggcagattc
ggacctttcatcaaatataaatcacttttcatcaatgttcccaagcgctatgactttgac
aaccttacacaggaagaaatgcatgagcttatagaagccaagctggaaaaagaagccaac
aggtacatccgccagtgggaagacgagaaaatttcgattgagaacggaaggtggggcccc
ttcatcaaattcggaaagaaaatgtttaagattccgaagaccaaaaaagatgaaaaatat
actgccgaagagctggctggggtctctctggatgaggtgaaaaagtggattactgcccag
gacaaggatgccttcaaggagaaaccgaaaaaagcagctgtaaagaaaactgctgtcaaa
aaacccgcagcaaaaaaaacaaccgccaaaaagcccgctgcaaaaaagaaataa
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