Chromobacterium phragmitis IIBBL 274-1: DK843_00100
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Entry
DK843_00100 CDS
T05744
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DK843_00100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chrb02000
]
DK843_00100
Transporters [BR:
chrb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DK843_00100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AXE32844
UniProt:
A0A344UC46
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All DBs
Position
20332..22110
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AA seq
592 aa
AA seq
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MCLKKPLMAALMVWGSLAPLHAAAAEKVLHVAFNAPETGFDPAKISDIYSSAVIEHIYDP
LLTFDYLSRPVKVIPNVTTAMPTVSADGLTYTFHLKKGIYFAPDPAFKGKKRELTAADYV
YSIKRLSDPTVASPLSDTFTDKLVGLADLARKAGKGKLDYDTPIEGVKTLDRYTLQLKFK
QPFPSLPYLLAGSWVEGQAREVIDAYGDNSNAHPVGTGPYKLALWQPGNRIVLTRNPNFR
RETFRYPSDGDAEDRKLASQMNGKAYPQIDRIEVSIIQEEQPMWLAFKSGELDLAGIPQP
LIRQVLRMDPKNPWRAELKPELRDKGVQLSRGLGEEVTFYAFNMKDSVVGGLSKDKIALR
RAISMAFDTNETIRDIRRNQAVQVQYIVPPNVAGHNPNFRAAYPYNPPLANALLDQFGYK
VGSDGYRHQPNGKPFAIDFLTGPTAIDKQWNEYWQKAFDRIKVKVNFRVMQWNEQVKAQR
DCKFGMNGGAWSADYPDGDNFTQLLYGGNIGNSNNACYQSARYDKLYEQSRLLPNGPERD
RLYDQMNKIVAGDTPWMFSDIRFTNALAQPWVRGFKHHPNFNAIWRFLDVEK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtgcctgaaaaagcctttgatggcggcactgatggtctgggggagcctggcgccgctg
catgcggcggccgcggagaaggtgctgcatgtggctttcaatgcgccggaaaccggattc
gatccggccaagatatccgacatctattcgtccgcggtgatcgagcatatctacgatccc
ctgctgaccttcgactatctgtcccgtccggtgaaggtgattcccaatgtgacgacggcg
atgccgaccgtcagcgcggatggcctgacgtataccttccatctcaagaaaggcatctat
ttcgcgccggacccggcgttcaagggcaagaagcgcgagctgaccgccgccgactatgtc
tactcgatcaagcgcctgtccgatccgactgtggcttcgccgctgagcgacaccttcacc
gacaagctggtgggcttggccgatctggccaggaaggccggcaagggcaagttggattac
gacacgccgatagagggcgtcaaaacactcgaccgctatacgctgcagctgaaattcaag
cagccctttccgtccctgccttatctgttggcgggcagctgggtggaaggtcaggcgcgc
gaagtgatcgacgcctatggcgacaattccaacgcccatcccgtgggcaccggtccgtac
aagctggcgctgtggcagcctggcaaccgcatcgtgttgacgcgcaatcccaatttccgg
cgtgaaaccttccgctacccgagcgatggcgacgcggaagaccgcaagctcgccagccag
atgaatggcaaggcctatccgcagatcgaccgcatcgaggtttccattatccaggaagag
cagccgatgtggctggctttcaagagcggcgaactggatttggccggcatcccgcaaccc
ttgatacgccaggtgttgcgcatggaccccaagaatccgtggcgggccgagctgaagccc
gagctgagggacaaaggcgtgcagctgagccgcggattgggcgaggaggtcaccttttac
gcgttcaacatgaaagactccgtcgtcggcgggctgagcaaggacaagatcgcgctgcgc
cgcgcgatctccatggccttcgacaccaacgagacgatacgcgacatccgccgcaaccag
gcggtgcaggtgcagtacatcgtgccgcccaacgtggctggccataatcccaatttccgt
gccgcctatccttacaacccgccattggccaacgcgctgctggatcagttcggctacaag
gtcggctccgatggctatcgtcatcagccgaatggcaagcccttcgccatcgacttcctg
actggccccaccgccatcgacaagcagtggaacgagtattggcagaaagccttcgaccgc
atcaaggtgaaggtgaatttccgggtgatgcagtggaatgagcaggtgaaggcgcagcgc
gactgcaagttcggcatgaacggcggcgcctggagcgcggattatcccgacggcgacaac
ttcacccagctgttgtacggcggcaatatcggcaactccaacaacgcctgctaccagtcc
gcccgctacgacaaactgtacgagcagtcccgcctgttgcccaacgggccggagcgcgat
cggctctacgatcagatgaacaagatcgtggccggcgacacgccgtggatgttcagcgac
atccgtttcaccaacgcgctggcgcagccatgggtgagggggttcaagcaccaccccaat
ttcaatgccatctggcgcttcctggacgtagaaaaataa
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