Chromobacterium phragmitis IIBBL 274-1: DK843_00600
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Entry
DK843_00600 CDS
T05744
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DK843_00600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrb03400
]
DK843_00600
DNA repair and recombination proteins [BR:
chrb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DK843_00600
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DK843_00600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AXE32939
UniProt:
A0A344UCE1
LinkDB
All DBs
Position
129978..130715
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AA seq
245 aa
AA seq
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MSQPGRVDKQPAYILHTQPYRETSLLLEVLTRDHGRFSLVARSARRPRSDLRGVLLPFQP
LTVSWFGKSELRTLHSADWDGGVRALSGMPLVCGFYLNELMMKLTARDDPEPRAFSVYDH
AVRELSAGATLSAALRRYELKLAQVLGYAPALNRDSRGEPVDPARHYLCRGAAMPEPDEH
PERVLADRAARLSGAALLAIQADDLDDPAVRGQARQLSRTWLSALLGDEPLAARQLLQAI
QSLSD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagccagccgggacgggtggacaagcagcctgcttacattctgcatacccagccatac
cgggaaaccagcttgctgctggaagtgctgacccgcgatcatggccgtttcagcctggtg
gcgcgcagcgcgcgccgtccgcgttcggatctgcgcggcgtgctgctgccgtttcagccg
ctgaccgtgtcctggttcggcaagagcgagctgcggacgctgcattcggccgattgggat
ggcggcgtgcgggcgttgtcgggcatgccgctggtttgcggattctacttgaacgaattg
atgatgaagctcacggcgcgggacgatcccgaaccgcgggctttttccgtttatgatcac
gcggtgcgcgagctgtccgccggcgcgacgctgtcggcggccttgcgccgctacgagctc
aagctggcccaggtgctgggctacgcgccggcgctgaaccgggacagccggggcgagccg
gtggaccccgcgcggcattatctgtgccgcggcgcggcgatgccggagccggacgagcat
ccggagcgggttttggccgaccgcgcggccaggctgtccggcgcggcgctgctggccatc
caggcggatgatctggacgatcccgcggtgcggggccaggcgcgccaactcagccggacc
tggctgtcggcgttgctgggcgacgagccgctggcggccaggcaattattgcaggccatc
cagtccctgtcggactga
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