Chromobacterium phragmitis IIBBL 274-1: DK843_01095
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Entry
DK843_01095 CDS
T05744
Name
(GenBank) choline dehydrogenase
KO
K03333
cholesterol oxidase [EC:
1.1.3.6
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb00984
Steroid degradation
chrb01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00984 Steroid degradation
DK843_01095
Enzymes [BR:
chrb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.3 With oxygen as acceptor
1.1.3.6 cholesterol oxidase
DK843_01095
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
Abhydrolase_1
Pyr_redox_2
DAO
Abhydrolase_6
FAD_oxidored
FAD_binding_2
Pyr_redox
NAD_binding_8
HI0933_like
GIDA
Motif
Other DBs
NCBI-ProteinID:
AXE33034
UniProt:
A0A344UCN6
LinkDB
All DBs
Position
228869..232327
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AA seq
1152 aa
AA seq
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MVRIASPISEIKEHYEIVVIGSGYGGGIAASRMARAGRSVCLLERGKEIIPGEYPDTLAE
ATEEFQVHHPDGHLGSRTGLYDLHVNAQQNVIVGCGLGGTSLINANVSLQPEPQVFEDPR
WPEGVRDHVDTLLKEGYARAQQMLKPMPYPDSAPTLPKLQANQKSGERIQAKHAFYRPPI
NVTFEKLPNDLNHVGVEQKPCNYCGDCVSGCNNHAKNTTLMNYLPDACNHGAEIFCQASV
RYLERDGDGWIVHFQYVGTGREKFDAPTLFVKADIVILSAGTLGSTEILLRSRAEGLSLS
DQLGMHMSGNGDILGFGYNNGDKINGIGFGTHSAKEIGPVGPCITSIIDMRDESGWRRRM
VIEEGSIPGAIGGMMVPAMAAASAELGQPSESGALAKIKYAAREVESALRGPYHGAMNRL
QTYLIMSHDNGAGRMVLDDHDQLRVDWPDVGEQPNFKIGNDRLQEATRALGGIYVRNPIW
TDLFKHSLITVHPLGGCVMGEDAGQGVVNHKGQAFSGTSGRDVYPGLYVTDGSVIPTSLA
VNPLFTISAVSERAMALLAADRGWTIDYTLPSAPRRAPQPQSDKPGIEFTETMKGFFSTA
HRQPAGTDLAAYEAAAQAGRDAASTMGFTVTVASDDLDRLISDPSHPATIVGTLSAPALS
ALPLTVSHGVFNLFEEYPQQVGERHMNYKMRLSAEDGAEYFFSAFKSVPSDHGPLKIWAD
TSTLYVTVYRGVDDGGEVVGSGVLHIEPADFARQMTTMKVLNVSSEAERLKQLARFGEYF
AGVLWESYGGVLAPNVYFNPDAPPRKKRPLNVGAPEVAFFPTDDGVNLRLTRYNGGGKGP
VMLVHGLGVGSNIFSTDTISTNLLEYLYQHGYDVWLLDFRVSILLPASQQQWDGDQVARY
DYPAAIQTIREATGAPDVQCVVHCYGATTFFMSMLAGLEGVRSVVCSQIAADIVVPAATQ
VKTGLHLPTVLDKLGVQSLTAYTASDSNWFEKLYDTALKGYALAEAQGYCNNPVCHRITF
MYAPLYRHETLNETLHDNLHELFGIANMRTMEHLARMCREGRLVAFDGADIYMPHFDRLR
LPILFISGGQNECYLPESTERTYDKLVERFGPERYSRLVVPGYGHIDCMFGKNAAADVYP
AIVAHLDKTAGG
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgaatcgcgtctcccatttccgaaatcaaggagcattacgaaattgtggtgatc
ggctccggctacggcggcggcatcgccgcgtcgaggatggcgcgcgccggccgctcggtc
tgtttgctggagcgcggcaaggaaatcattcccggcgaatatccggacacgctggcggag
gcgaccgaggaattccaggtccaccatcccgatggccacctgggctcccgcaccggcctg
tacgatcttcacgtcaacgcgcagcagaatgtgatcgtcggctgcggcctgggcggtacc
tcgctgatcaacgccaacgtctcgctgcagccggagccgcaggtgttcgaggacccgcgc
tggccggagggcgtgcgcgatcatgtggacacgctgctgaaggagggctacgcgcgggcg
cagcagatgctgaagcccatgccgtatccggacagcgcgcccacattgcccaagctgcag
gccaaccagaagtccggcgagcgcatccaggccaagcatgccttctaccggccgccgatc
aacgtcactttcgaaaagctgccgaacgatctcaaccacgtcggcgtcgagcagaaaccc
tgtaattattgcggcgactgcgtgtccggctgcaacaaccacgccaagaacaccacgctg
atgaactatctgccggacgcctgcaaccacggcgcggagatattctgccaggcgtcggtg
cgctacctggaacgggacggcgacggctggatcgtccatttccagtacgtcgggaccggg
cgggagaaattcgacgcgccgacgttgttcgtcaaggcggacatcgtcatcctgtccgcc
ggcacgctgggctccaccgaaatcctgctgcgctcccgcgccgagggcctgtcgctgtcc
gaccaactgggcatgcacatgagcggcaacggcgacatcctcggcttcggctacaacaac
ggcgacaagatcaacggcatcggtttcggcacgcactcggccaaggagatcggcccggtc
ggcccctgtatcacctccatcatcgacatgcgcgacgagagcggctggcgccggcgcatg
gtgatagaggagggctccattcccggcgccatcggcggcatgatggtgccggcgatggcc
gcggcgtcggccgagctgggccagccttcggaaagcggcgcgctggccaagatcaagtac
gcggccagggaagtggaaagcgcgctgcgcggcccctatcacggcgcgatgaaccggctg
cagacctatctgatcatgagccacgataacggcgccggccggatggtcttggatgatcac
gaccagttgcgggtggactggccggacgtgggcgagcagcccaacttcaagatcggcaac
gacaggctgcaggaggccacccgggctttgggcggcatctatgtgcgcaacccgatctgg
accgatctgttcaagcacagcctgatcaccgtgcacccgctgggcggctgcgtgatgggc
gaggacgccggccagggcgtggtcaaccacaagggccaggcgttcagcggaacgagcggg
cgcgatgtctatcccggcttgtacgtgaccgacggctcggtgattcccacctcgctggcg
gtgaacccgctgttcaccatctcggcggtcagcgagcgggcgatggcgctgctggccgcg
gaccgcggctggacgatcgactacacgctgccgtcggcgccgcgccgcgcgccgcagccg
cagtcggacaagcccggcattgaattcaccgagacgatgaagggcttcttctccaccgcc
caccgccagccggctggaaccgatctggccgcgtacgaggcggcggcccaggccggccgg
gatgccgcttcgaccatgggcttcaccgtcacggtggcgtccgacgatctggaccggctg
atttccgaccccagccatccggccaccattgtcggcacgctgagcgcgccggccttgtcg
gcgttgccgctgacggtcagccatggcgtgttcaacctgttcgaggagtatccgcagcag
gtgggcgagcgccacatgaattacaagatgcgcttgagcgccgaggatggggccgagtac
ttcttcagcgcattcaagtcggtgcccagcgatcatggcccgctcaagatctgggccgat
accagcaccttgtacgtgacggtgtaccggggcgtggacgacggcggcgaggtggtcggc
agcggcgtgctgcacatcgagccggccgacttcgcccggcagatgaccacgatgaaggtg
ctcaacgtctccagcgaggccgagcggttgaagcagctggcccgtttcggcgagtatttc
gccggcgtgctgtgggagagctacggcggcgtgctggcgcccaatgtctacttcaatccg
gacgcgccgccgcgcaagaagcgcccgctcaacgtcggcgcgccggaggtggcgttcttc
ccgaccgacgacggcgtcaacttgcggctcacccgctacaacggcggcggcaaggggccg
gtgatgctggtgcatggtctgggcgtggggtcgaacatcttctccaccgacaccatctcc
accaatctgctggagtacctgtaccagcacggctacgacgtgtggctgctggacttccgc
gtcagcatcctgctgccggccagccagcagcagtgggacggggaccaggtggcgcgctac
gactacccggcggcgatccagacgatacgggaagccaccggcgcgcccgacgtgcagtgc
gtggtgcattgctacggcgccaccaccttcttcatgtccatgctggccgggctggagggg
gtgaggtcggtggtgtgctcgcagatcgccgccgacatcgtggtgccggccgccacccag
gtgaagaccggcctgcatctgccgacggtgctggacaagctgggcgtgcaatcgttgacc
gcctataccgcgtccgactccaattggttcgagaagctgtacgacaccgcgctgaagggc
tatgcgctggcggaggcgcaaggctattgcaacaacccggtctgccaccgcatcaccttc
atgtacgcgccgctgtaccgtcacgaaaccctgaacgagacgctgcacgacaatctgcac
gagctgttcggcatcgccaatatgcggacgatggagcatctggcgcgtatgtgccgcgag
gggaggctggtggcgttcgacggcgcggacatctacatgccgcacttcgaccggctgcgg
ctgcccatcctgttcatcagcggcgggcagaacgagtgctacctgccggaaagcaccgag
cgcacgtacgacaagctggtggagcgtttcgggccggagcgctacagccggctggtggtg
ccgggctacggccatatcgactgcatgttcggcaagaacgcggcggccgatgtctacccg
gccatcgtcgcccacctggacaagaccgcaggcggctga
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