Chromobacterium phragmitis IIBBL 274-1: DK843_02900
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Entry
DK843_02900 CDS
T05744
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrb03032
]
DK843_02900
03036 Chromosome and associated proteins [BR:
chrb03036
]
DK843_02900
03400 DNA repair and recombination proteins [BR:
chrb03400
]
DK843_02900
DNA replication proteins [BR:
chrb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DK843_02900
Chromosome and associated proteins [BR:
chrb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DK843_02900
DNA repair and recombination proteins [BR:
chrb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DK843_02900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
UBA_HYPK
Lmo2446-like_N
Myb_DNA-bind_8
Motif
Other DBs
NCBI-ProteinID:
AXE33352
UniProt:
A0A344UDK4
LinkDB
All DBs
Position
complement(626969..627238)
Genome browser
AA seq
89 aa
AA seq
DB search
MNKSELIDAIAAEADISKAAAAKALDGMVAAVTTALKKGDTVTLVGFGTFYVGERAERSG
RNPKTGATIKIPAARSPKFRAGKALKDAL
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtctgaactgattgacgccatcgcggctgaagccgatatctccaaggctgcc
gccgccaaggctttggacggcatggttgctgccgttaccactgccctgaaaaaaggcgat
accgtgaccctggtgggtttcggcaccttctatgtgggcgagcgcgccgagcgtagcggc
cgcaacccgaagaccggcgccaccatcaagatcccggctgcacgttctccgaagttccgt
gctggcaaggcactgaaagacgcgctataa
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