Chromobacterium phragmitis IIBBL 274-1: DK843_05890
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Entry
DK843_05890 CDS
T05744
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb02020
Two-component system
chrb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DK843_05890
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DK843_05890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
chrb02022
]
DK843_05890
02035 Bacterial motility proteins [BR:
chrb02035
]
DK843_05890
Two-component system [BR:
chrb02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
DK843_05890
Bacterial motility proteins [BR:
chrb02035
]
Flagellar system
Flagellar assembly proteins
Others
DK843_05890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_30
Mg_chelatase
AAA_3
AAA_2
AAA_18
nSTAND3
HTH_28
AAA_19
AAA
Sigma70_r4_2
NB-ARC
MerR
AAA_14
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AXE33879
UniProt:
A0A344UF31
LinkDB
All DBs
Position
complement(1248737..1250113)
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AA seq
458 aa
AA seq
DB search
MKYLPILVVEDDADLREAIVDTLSLAGYPTLEAADGGSALQTLAQEPVGLIVSDAQMAPM
DGYQLFEEAKRRYPGVPFILMTAYGVIERAIELLRAGAAHYLLKPFEPQNLLAEVGKHLL
AMPEDDGGEVVAESAAMRQLFALAGRVAQSEASVMISGPSGSGKEVLARYIHRHSRRGEG
AFVAVNCAAIPDNLLESTLFGHERGAFTGAAQALPGKFEQAQGGTILLDEVTEMPLPLQA
KLLRVLQEREVERIGSTRAIKLDIRVLATSNRDLQAAVEAGNFREDLYFRLNVFPLKIPA
LAERRDDILPLARFLLKKHAEAAGRASLVFSKDAERHLTAYSWEGNIRELDNVVQRAVIL
AAGAEIIAADLMLDDIAGVGQFTRAESEMDSSASGETDMKTLEKRHILETLAAAGGVKRL
AAEKLGISERTLRYKLQRYRDEEAADADGNVPESDGTE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatcttccgattttggtggtcgaagacgacgccgacctgcgcgaggccattgtg
gacaccttgtctctggccggctatccgacgctggaggccgccgatggcggcagcgctttg
cagacgctggcgcaggagccggttgggctgatcgtgtctgacgcccagatggcgccgatg
gatggttatcagctgttcgaggaggcgaagaggcgttatccgggcgtgcccttcattctg
atgaccgcctatggcgtgatcgagagggcgatcgaactgctgcgcgccggcgccgcgcat
tacctgctgaagcccttcgagccgcagaatctgctggcggaagtggggaagcatctgttg
gcgatgccggaggacgatggcggcgaagtggtggcggagtccgccgcgatgcggcagttg
ttcgcgctggcgggacgggtggcgcagagcgaggccagcgtgatgatttccggccccagc
ggcagcggcaaggaggtgctggcccggtacattcaccggcactcccgacgcggtgagggc
gcgttcgtcgcggtcaattgcgcggcgattcctgacaatctgctggagtccacgctgttc
ggccacgagcggggcgccttcaccggcgcggcgcaggcattgcccggcaagttcgagcag
gcgcagggcggcaccatccttttggatgaggtgaccgagatgccgctgcccttgcaggcc
aagctgctgagagtgttgcaggagcgtgaggtggagcgcattggcagcactcgcgccatc
aaattggacatccgggtgctggccacatccaaccgcgatctgcaggcggcggtggaggcg
ggcaattttcgggaggacctgtatttccgcctgaatgtctttccgctgaaaattccggct
ctggcggagcggcgagacgatattctgcctttggcacgattcctgcttaaaaaacatgcg
gaggccgcgggccgcgcgtccctggtgttttccaaggatgcggaacgtcatttgacggcc
tatagttgggagggtaacatccgcgaactggataatgtcgtgcagcgggcggtgattctt
gccgccggggcggaaattattgccgccgacttgatgctggacgatattgctggcgtgggg
cagtttacccgggcggagtccgaaatggacagttcggcgtcgggtgaaaccgacatgaaa
acacttgaaaaacgccatattctggaaacattggcggcggccggtggcgtaaagaggctg
gcggccgaaaagctgggcatcagcgagcgcaccttgcgctacaaattgcagcgttaccgc
gatgaggaagctgcggatgccgatggaaatgttccggagagcgatggcacggagtag
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