Chromobacterium phragmitis IIBBL 274-1: DK843_07580
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Entry
DK843_07580 CDS
T05744
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb00260
Glycine, serine and threonine metabolism
chrb00630
Glyoxylate and dicarboxylate metabolism
chrb00670
One carbon pool by folate
chrb00785
Lipoic acid metabolism
chrb01100
Metabolic pathways
chrb01110
Biosynthesis of secondary metabolites
chrb01200
Carbon metabolism
Module
chrb_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DK843_07580 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DK843_07580 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DK843_07580 (gcvP)
00670 One carbon pool by folate
DK843_07580 (gcvP)
Enzymes [BR:
chrb01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
DK843_07580 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
DUF5779
Motif
Other DBs
NCBI-ProteinID:
AXE34175
UniProt:
A0A344UFX7
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Position
complement(1565334..1568186)
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AA seq
950 aa
AA seq
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MSLSELFNRHEFIARHIGPSDAERAEMLAAVGVPSIDALVDQTLPADIRLNRRLDLPSPQ
PEAEALAALKAVASKNVVNKSFIGLGYYPVLTPTVILRNVLENPGWYTAYTPYQAEIAQG
RLEALLNFQQMVIDLTGLEMANASLLDEATAAAEAMAMAKRVSKSKSASFFVDSRVLPQT
LDVMKTRAKYFGFELVSGHPEEAGNGDYFGALFQYPGEAGDLIDLTPHIAAIKAKGGVVA
VAADVMALVALKSPAEMGADIALGNTQRFGVPMGFGGPHAAYFAFKDEMKRSAPGRIIGV
SIDAKGKTALRMALQTREQHIRREKANSNICTSQVLLANIAGLYAVYHGAEGVQRIAARI
HRLAAIFAHAVKEAGGKLAFDRFFDTVQVDAPKADAIYAAALAAGYNLRRVGKTVLGVAF
HEAATEADLAKLIELFTGKPADIAALDAAAQDAIPAALKRESAILTHPVFNTHHSEHEML
RYMKKLENRDLAMNHSMISLGSCTMKLNATSEMIPITWPEFANMHPFAPREQTVGYLELI
EGLQAQLKAITGFDAISMQPNSGAQGEYAGLLAISRYHESRGEGHRNICLIPQSAHGTNP
ATAQMMNMQVVVVKCDDAGNVDVADLKAKAEQHAANLAALMITYPSTHGVFEQGIKEICE
IVHSHGGQVYMDGANLNAQVGLTRPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGLKAH
LAPFMANHVVASVPGAVAGQSAVSAAPFGSASILPISYMYIAMMGAEGMKQATENALLSA
NYLATRLAEHFPVLYTGANGRVAHECIIDLRPLKAASGVTEVDVAKRLMDYGFHAPTMSF
PVPGTLMIEPTESEPKAELDRFIAAMAAIRAEIDQVQNGAWPADNNPLVNAPHSKADIAG
DWNRPYSREQGLFPLPYVLENKFWPSVNRIDDVYGDRNVVCSCPSTDSYM
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctctccgaactcttcaatcgccacgaattcatcgcccgccacattggcccgtcc
gacgccgagcgcgccgagatgctggccgccgtcggcgtgccgtccatcgacgcgctggtc
gaccagaccctgccggccgacatccgcctgaaccgccgactggatctgccgtcgccgcag
ccggaagccgaggcgctggccgcgctgaaggcggtagcgtccaagaacgtggtcaacaaa
tccttcatcggcctgggttactacccggtgctgacgcccaccgtcatcctgcgcaatgtg
ctggaaaatccgggctggtacaccgcctacaccccgtaccaggccgagatcgcccaaggc
cgcctggaagcattgctgaacttccagcagatggtgatagacctgaccggcctggaaatg
gccaatgcgtcgctgctggacgaggctaccgccgccgccgaggcgatggcgatggccaag
cgcgtgtccaagtccaagtccgccagcttcttcgtcgacagccgcgtgctgccgcagacg
ctggacgtgatgaagacccgcgccaagtacttcggcttcgagctggtgtccggccatccg
gaagaggccggcaacggcgactacttcggcgcgctgttccagtatccgggcgaagccggc
gatctgatcgatctgaccccgcatatcgcggccatcaaggccaagggcggcgtggtcgcc
gtcgccgccgacgtgatggcgctggtggcactgaagtcgccggctgaaatgggcgccgac
atcgctctgggcaacacccagcgcttcggcgtgccgatgggcttcggcggcccgcacgcc
gcttacttcgcgttcaaggacgagatgaagcgttcggcgccgggccgcatcatcggcgtg
tccatcgacgccaagggcaagaccgcgctgcgcatggcgctgcagacccgcgagcagcac
atccgccgcgagaaggccaactccaacatctgcaccagccaggtgctgctggccaatatc
gccggcctgtacgcggtctaccacggcgcggaaggcgtgcagcgcatcgccgcacgcatc
catcgcctggccgccatcttcgcccacgcggtgaaagaggccggcggcaagctggcgttc
gaccgcttcttcgacaccgtgcaggtggatgcgcccaaggccgacgccatctacgccgcc
gcgctggccgccggctacaacctgcgccgcgtcggcaagaccgtgctgggcgtggccttc
catgaagccgccaccgaagccgacctggccaagctgatcgagctgttcaccggcaagccg
gccgacatcgccgccttggacgccgccgctcaggacgcgattccagccgcattgaagcgt
gagtcggccatcctgacccacccggtgttcaacacccaccatagcgagcacgagatgctg
cgctatatgaagaagctggaaaaccgcgacctggcgatgaatcactcgatgatctcgctg
ggcagctgcaccatgaagctgaacgccaccagcgagatgattccgatcacctggccggaa
ttcgccaatatgcacccgttcgcgccgcgcgagcagaccgtgggctatctggagctgatc
gaaggcctgcaggcgcagctgaaggcgatcaccggcttcgacgccatctccatgcagccc
aactccggcgcccagggcgaatacgccggcctgctggccatcagccgctaccatgagtcg
cgcggcgaaggccatcgcaatatctgcctgattccgcaatcggcgcacggcaccaacccg
gccaccgcgcagatgatgaatatgcaggtggtggtggtgaagtgcgacgatgccggcaac
gtcgacgtcgccgatctgaaggccaaggccgagcagcacgccgccaatctggccgcgctg
atgatcacttatccgtccacccacggcgtgtttgagcagggcatcaaagagatctgcgaa
atcgtgcacagccacggcggccaggtctatatggacggcgccaacctgaacgcgcaggtg
ggcctgacccgtccggccgacatcggcgccgacgtgtcgcacatgaatctgcacaagacc
ttctgcatcccgcacggcggcggcggaccgggcatgggcccgatcggcctcaaggcccat
ttggcgccgttcatggccaaccatgtggtggcttcggtgccgggcgcggtagccggccag
agcgcggtatccgccgcgccgttcggatcggcttccatcttgccgatctcgtatatgtac
atcgcgatgatgggcgcggaaggcatgaagcaggcgacggaaaacgcgctgttgtctgcc
aactacctggccacccgcctggccgagcacttcccggtgctgtacaccggcgctaatggc
cgcgtcgcccatgagtgcatcatcgatctgcgcccgttgaaggcagcctccggcgtgacc
gaggtggacgtggccaagcgcctgatggactacggcttccacgccccgaccatgagcttc
ccggtgccgggcactttgatgatcgaaccgaccgagtccgagcccaaggccgagctggac
cgcttcatcgccgcgatggccgccatccgcgccgagatcgaccaggtgcagaacggcgcc
tggccggcggacaacaatccgctcgtcaacgcgccgcacagcaaggccgacatcgccggc
gactggaaccgcccatatagccgcgagcagggcttgttcccgttgccttacgtgctggaa
aacaagttctggccgagcgtgaaccgcatcgacgacgtctacggcgaccgcaacgtggtg
tgcagctgcccgagcacggatagctatatgtaa
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