Chromobacterium phragmitis IIBBL 274-1: DK843_08970
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Entry
DK843_08970 CDS
T05744
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chrb03021
]
DK843_08970
Transcription machinery [BR:
chrb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DK843_08970
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AXE34417
UniProt:
A0A344UGL9
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All DBs
Position
1844299..1845249
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AA seq
316 aa
AA seq
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MSNEIDILDEDDILDEDNGEEASAEAEAEESNDSTSVFEDVVADVTQIYLNDIGNNALLT
PQEELALARRVVAGEFEARQKMIEHNLRLVVNIAKHYINRGLALLDLIEEGNIGLMHALE
KFDPERGFRFSTYATWWIRQSIERAIMNQSRTIRLPVHVIKELNVYLRASRHLESQIGRE
PSVEEIAHLVGKPVDDVRKVLNLNERMASLDAPLDIDPMLSIGESIPDEQHEEPELQLHN
SQLETFVHDWLSQLNEKQRLVIERRYGLNGYEICTLEELAASLSLTRERVRQIQIEGLEQ
LRRILRRKGISRDFLL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgaaatagacatcctggacgaggatgacattctcgacgaagacaacggcgaa
gaagcttccgccgaggccgaagccgaggaaagcaacgacagcacctcggtcttcgaagac
gtggtcgccgacgtcacccagatttatctgaacgacatcggcaacaacgcgctcttgacg
ccgcaggaggaactggctctcgccaggcgggtggtggccggcgagttcgaagcccgccag
aagatgatcgagcacaaccttcggctggtggtgaacatcgccaaacactacatcaaccgc
ggtctggccctgctcgatctgatcgaagagggcaatatcggcctgatgcacgcgctggaa
aagttcgacccggagcgcggtttccgcttctccacctatgccacctggtggatacgccag
agcatcgagcgggcgatcatgaaccagtcgcgcaccattcggctaccggttcacgtgatc
aaggagttgaacgtgtatctgcgggcctcgcgccatctggaaagccagatcggccgcgag
cccagcgtcgaggagatcgcccatctggtcggcaagccggtggacgacgtgcgcaaggtg
ctgaacctgaacgaacgcatggcctcgctggacgcgccgctggacatcgatccgatgctg
tccatcggcgagtccatcccggacgagcagcacgaggagccggaactgcagctgcacaac
agccagcttgaaaccttcgtccacgactggctgagccagttgaacgagaagcagcggctg
gtaatcgagcggcgctacggcctcaacggctacgaaatctgtacgctggaagagctggca
gcctccctgagcctaacccgcgagcgggtgcgccagatccagatcgagggtctggaacaa
ctgcgccgcatcctgcgccgcaagggcatttcgcgcgatttcctgctctga
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