Chromobacterium phragmitis IIBBL 274-1: DK843_10500
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Entry
DK843_10500 CDS
T05744
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DK843_10500 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrb03400
]
DK843_10500 (xth)
Enzymes [BR:
chrb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DK843_10500 (xth)
DNA repair and recombination proteins [BR:
chrb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DK843_10500 (xth)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AXE34690
UniProt:
A0A344UHE2
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All DBs
Position
complement(2183857..2184630)
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AA seq
257 aa
AA seq
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MRFATWNVNSLKVRLPQVLQWLADTGVEVLCLQELKMDQDVFPLAEIEAAGYRAAWFGQK
TYNGVAILVRAPLEMSDVVAGIPGYGDEQRRVIAATVNGVRVICGYFVNGEAVDSPKYPY
KLEWLSKLEGYVAAELAKHPNLLLLGDYNIAPEDRDVYDPEGWREQVLCSTPERDAFRRL
IALGLSDSFRLFNQEEKQYSWWDYRQMMFRRNKGVRIDHILVSDALKPRAQACEIDKAPR
KWERPSDHTPVVLTLAD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttgccacctggaacgtcaattccctgaaagtccgcctgccgcaggtgctgcag
tggctggccgacaccggcgtcgaagtgctgtgcctgcaggaactgaagatggaccaggac
gtcttcccgctggcggagatcgaggcggccggctaccgcgcggcctggttcggtcagaag
acctacaacggcgtcgccattctggtgcgcgcgccgctggaaatgagtgatgtggtcgcc
ggcattcccggctacggcgacgagcagcgccgggtgatcgccgccacggtgaacggcgtg
cgggtgatctgcggctatttcgtcaacggcgaggcggtggattcgcccaaatacccgtac
aagctggagtggctgtccaagctggagggctacgtcgccgccgagctggccaagcatccg
aacctgctgcttctgggcgactacaacatcgcgccggaagaccgcgacgtctacgacccg
gaaggctggcgcgagcaggtgctgtgcagcacgccggagcgcgacgccttccgccgcctg
atcgcgctgggcctgtccgacagcttccgcctgttcaaccaggaggaaaagcagtacagc
tggtgggactaccgccagatgatgttccgccgcaacaagggcgtgcgtatcgaccacatc
ctggtcagcgatgcgctcaagccgcgcgcgcaggcctgcgagatcgacaaggcgccgcgc
aagtgggagcgcccgtccgaccataccccggtggtgctgacgctggccgactga
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