Chromobacterium phragmitis IIBBL 274-1: DK843_11920
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Entry
DK843_11920 CDS
T05744
Name
(GenBank) proline--tRNA ligase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DK843_11920
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
chrb01007
]
DK843_11920
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chrb03016
]
DK843_11920
Enzymes [BR:
chrb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
DK843_11920
Amino acid related enzymes [BR:
chrb01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
DK843_11920
Transfer RNA biogenesis [BR:
chrb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DK843_11920
Prokaryotic type
DK843_11920
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
tRNA_edit
HGTP_anticodon
DUF6325
Motif
Other DBs
NCBI-ProteinID:
AXE34943
LinkDB
All DBs
Position
complement(2456990..2458696)
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AA seq
568 aa
AA seq
DB search
MRASQFFISTLKEAPADADITSQKLMMRAGFIRKQAAGIYSWMPMGLRVLRKVETIIREE
MNRAGAIEVSLPVVQPAELWQETGRWDTMGDELLRFKDRHERDFALQPTAEEVIADIARR
ELRSYRSLPKNFYQIQTKFRDERRPRFGVMRGREFTMKDAYSFDRSVEDALKSYDNMYAA
YRRIFDRFGLSYRAVAADTGAIGGDISHEFQVIADTGEDAIVYCPQSEYAANIELAEAVA
PAGERAAASAALSKAHTPKVKTIAELVDFLKIDIKQTVKAVVVEGEEGEAVLMLVRGDHE
LNEVKAQKIAGIKNPLAFASPAAIRDAFGANPGSLGPVGFKGRVIADRTVAKMADFVIGA
NEDDQHYTGANFGRDCAEPEVFDIRNVVEGDPSPDGQGVLAIQRGIEVGHVFYLGTKYSA
AMNATFLDEDGKPKPFEMGCYGIGVTRILGAAIEQNFDDKGMIWPDAIAPFVVALCPVGY
DRSEAVKDAADKLYADLTAKGVDVILDDRGERPGAMFADWELIGAPHRVTIGDRGLKEGK
VEYQHRRDSEATAVAADAILEHVLSKLA
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcatcgcagtttttcatttccaccctgaaagaggctcccgccgacgccgacatc
accagccagaagctgatgatgcgcgccggcttcatccgcaagcaggcggccggcatctat
tcctggatgccgatgggcctgcgcgtgctgcgcaaggttgaaaccatcatccgcgaggaa
atgaaccgcgccggcgctatcgaggtgagcctgccggtcgtgcagccggccgaactgtgg
caggaaaccggccgctgggacaccatgggcgacgagctgctgcgcttcaaggatcgccac
gagcgcgatttcgcgctgcagccgaccgccgaggaagtgatcgccgacatcgcccgccgc
gagctgcgcagctatcgctcgctgccgaaaaacttctaccagatccagaccaagttccgc
gacgagcgccgtccgcgcttcggcgtgatgcgcggccgcgagttcaccatgaaggatgcc
tattccttcgatcgtagcgtagaggatgcgctcaagagctacgacaatatgtacgccgct
taccgccgcatcttcgaccgcttcggtctgagctaccgcgcggtggcggccgacaccggc
gccatcggcggtgatatttcgcacgagttccaggtgatcgccgataccggcgaagacgcc
atcgtctactgcccgcaatcggaatacgcggccaatatcgaactggccgaagccgtggcc
ccggccggcgagcgcgccgcagcatccgccgcgctgagcaaggcgcatacgcccaaggtc
aagaccatcgccgagctggtggacttcctgaagatcgacatcaaacagaccgtcaaggcg
gtggtggtggaaggcgaagagggcgaagcggtgctgatgctggtgcgcggcgaccacgag
ctgaacgaagtgaaggcgcagaagatcgccggcatcaagaatccgttggccttcgccagc
ccggccgccatccgcgacgccttcggcgccaatccgggctccctgggtccggtgggcttc
aagggccgcgtcatcgccgaccgcaccgtggccaagatggcggatttcgtcatcggcgcc
aacgaggacgaccagcactacaccggcgccaacttcggccgcgactgcgccgagccggaa
gtgttcgatatccgcaacgtggtggaaggcgatccgtcgccggacggccagggcgtgctg
gccatccagcgcggcatcgaagtgggccacgtgttctatctgggcaccaagtactccgcc
gcgatgaacgccaccttcctggacgaagacggcaagccgaaaccgttcgagatgggctgc
tacggcatcggcgtcacccgcatcctgggcgcggccatcgagcagaacttcgacgacaag
ggcatgatctggccggacgccatcgcgccgttcgtggtggcgctgtgcccggtgggctac
gaccgctccgaggcggtgaaggacgcggccgacaagctgtacgctgatctgacagccaag
ggcgtcgacgtgatcctggacgaccgcggcgagcgcccgggcgcgatgttcgccgactgg
gagctgatcggcgcgccgcatcgcgtcaccatcggcgatcgcggcctgaaggaaggcaag
gtcgaataccagcaccgccgcgacagcgaagccaccgccgtcgccgccgatgctattctg
gagcatgtcctctccaagctggcctga
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