Chromobacterium phragmitis IIBBL 274-1: DK843_12230
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Entry
DK843_12230 CDS
T05744
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb00010
Glycolysis / Gluconeogenesis
chrb00020
Citrate cycle (TCA cycle)
chrb00260
Glycine, serine and threonine metabolism
chrb00280
Valine, leucine and isoleucine degradation
chrb00310
Lysine degradation
chrb00380
Tryptophan metabolism
chrb00620
Pyruvate metabolism
chrb00630
Glyoxylate and dicarboxylate metabolism
chrb00640
Propanoate metabolism
chrb00670
One carbon pool by folate
chrb00785
Lipoic acid metabolism
chrb01100
Metabolic pathways
chrb01110
Biosynthesis of secondary metabolites
chrb01120
Microbial metabolism in diverse environments
chrb01200
Carbon metabolism
chrb01210
2-Oxocarboxylic acid metabolism
chrb01240
Biosynthesis of cofactors
Module
chrb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
chrb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
chrb_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
chrb_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
DK843_12230 (lpdA)
00020 Citrate cycle (TCA cycle)
DK843_12230 (lpdA)
00620 Pyruvate metabolism
DK843_12230 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
DK843_12230 (lpdA)
00640 Propanoate metabolism
DK843_12230 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DK843_12230 (lpdA)
00280 Valine, leucine and isoleucine degradation
DK843_12230 (lpdA)
00310 Lysine degradation
DK843_12230 (lpdA)
00380 Tryptophan metabolism
DK843_12230 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DK843_12230 (lpdA)
00670 One carbon pool by folate
DK843_12230 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
chrb04147
]
DK843_12230 (lpdA)
Enzymes [BR:
chrb01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
DK843_12230 (lpdA)
Exosome [BR:
chrb04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
DK843_12230 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
FAD_oxidored
GIDA
Pyr_redox_3
Thi4
NAD_binding_8
FAD_binding_2
Biotin_lipoyl_2
FAD_binding_3
HI0933_like
AlaDh_PNT_C
GCV_H
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AXE34997
UniProt:
A0A344UI99
LinkDB
All DBs
Position
complement(2534095..2535894)
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AA seq
599 aa
AA seq
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MSNLIELKVPDIGGHNNVDVIEVFVKPGDVIEKEASLITLETDKATMEVPAEAAGTVKEV
RVAVGDKVSEGDVVVILEAAGAAAAAPAEVKPVETTGVASATTQAGFAPQAAPVAASHSG
GADIECDVMVLGGGPGGYSAAFRAADLGLKVVIVERYATLGGVCLNVGCIPSKALLHNAA
VIDEVSHLAANGIKFGKPEVDIDMLRGYKEKVIAKLTGGLGGMAKARKVEIVRGNGHFID
PHHIEVSVTTGQGREESGEKKIVKFKNAIIAAGSRVVKLPFIPNDPRVVDSTGALELKGV
ADRMLIIGGGIIGLEMGTVYSTLGARLDVVEMLDGLMQGADRDLVKVWQKWNAHRFDNIM
LNTKTVAVEPKEDGVWVTFEGAQAPKEPQRYDLVLYATGRAPNGKLIGAENAGIAVTDRG
FIQVDKQQRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAENCAGQKAYFDARVIPGVAYT
DPEVAWVGVTEDEAKKQGLKIEKGVFPWAASGRAIANGRDEGFTKLIFDAESHQIIGGGI
VGPHAGDMIGEVCLAIEMGCDATDIGKTIHPHPTMGESIGMAAEVAHGTCTDLPPQRKK
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatctgatcgaattgaaagtcccggacatcggcggccacaacaacgtggacgtg
atcgaagtgttcgtcaaaccgggcgacgtgattgaaaaagaagccagcctgatcacgctg
gaaaccgacaaggccaccatggaagtgccggccgaagccgccggcaccgtcaaggaagtg
cgcgtcgccgtgggcgacaaagtctccgagggcgatgtggtcgtcatcctagaagccgcc
ggcgcagccgccgcggctccggctgaagtgaagccggtggaaaccaccggcgtcgcctcc
gccaccacccaagccggcttcgcgccgcaagccgctccggtcgccgccagccatagcggc
ggcgccgacatcgaatgcgacgtgatggtgctgggcggcggccccggcggttactccgcc
gccttccgcgcggccgacctgggcctgaaagtggtcatcgtcgagcgctacgccaccctg
ggcggcgtgtgcctgaacgtgggctgcatcccgtccaaggcgctgctgcacaatgcggcg
gtgatcgacgaagtgagccacctggccgccaacggcatcaagttcggcaagccggaagtg
gacatcgacatgctgcgcggctacaaggaaaaggtcatcgccaagctgaccggcggcctg
ggcggcatggccaaggcgcgcaaggtggagatcgtgcgcggcaacggccacttcatcgat
ccgcaccacatcgaagtctctgtgaccaccggccagggccgcgaagaatcgggcgagaag
aagatcgtcaagttcaagaacgccatcatcgccgccggctcccgcgtggtgaagctgccg
ttcatcccgaacgacccgcgcgtggtggactccaccggcgcgctggagctgaagggcgta
gccgaccgcatgctgatcatcggcggcggcatcatcggcctggaaatgggcaccgtctac
tccacgctgggcgcgcgcctggacgtggtggaaatgctggacggcctgatgcaaggcgcc
gaccgcgatctggtcaaggtatggcagaagtggaacgcccaccgtttcgacaacatcatg
ctgaacaccaagaccgtggccgtggagccgaaggaagacggcgtgtgggtgactttcgaa
ggcgcgcaagccccgaaagagccgcaacgctacgacctggtgctgtacgccaccggccgc
gcgccgaacggcaagctgatcggcgcggaaaacgccggcatcgcggtgaccgaccgcggc
ttcatccaggtggacaagcagcagcgcaccaatgtgccgcacatcttcgccatcggcgac
atcgtcggccagccgatgctggcgcacaagggcgtgcatgaaggccatgtggcggcggaa
aactgcgctggccagaaggcctacttcgacgcccgcgtgattccgggcgtggcctacacc
gatccggaagtggcctgggtgggcgtgaccgaagacgaagccaagaagcaaggcctgaag
atcgagaagggcgtgttcccgtgggccgcctccggccgcgccatcgccaacggccgcgac
gaaggcttcaccaagctgatcttcgatgccgaaagccaccagatcatcggcggcggcatc
gtaggcccgcacgcgggcgacatgatcggcgaggtgtgtctggcgatcgagatgggttgc
gacgcgaccgacatcggcaagaccatccacccgcacccgacgatgggcgagtccatcggc
atggcggcggaagtggcgcacggcacctgcacggacctgccgccgcaacgcaagaagtaa
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