KEGG   Chromobacterium phragmitis IIBBL 274-1: DK843_12230
Entry
DK843_12230       CDS       T05744                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
chrb  Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb00010  Glycolysis / Gluconeogenesis
chrb00020  Citrate cycle (TCA cycle)
chrb00260  Glycine, serine and threonine metabolism
chrb00280  Valine, leucine and isoleucine degradation
chrb00310  Lysine degradation
chrb00380  Tryptophan metabolism
chrb00620  Pyruvate metabolism
chrb00630  Glyoxylate and dicarboxylate metabolism
chrb00640  Propanoate metabolism
chrb00670  One carbon pool by folate
chrb00785  Lipoic acid metabolism
chrb01100  Metabolic pathways
chrb01110  Biosynthesis of secondary metabolites
chrb01120  Microbial metabolism in diverse environments
chrb01200  Carbon metabolism
chrb01210  2-Oxocarboxylic acid metabolism
chrb01240  Biosynthesis of cofactors
Module
chrb_M00009  Citrate cycle (TCA cycle, Krebs cycle)
chrb_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
chrb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
chrb_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:chrb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DK843_12230 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DK843_12230 (lpdA)
   00620 Pyruvate metabolism
    DK843_12230 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DK843_12230 (lpdA)
   00640 Propanoate metabolism
    DK843_12230 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DK843_12230 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DK843_12230 (lpdA)
   00310 Lysine degradation
    DK843_12230 (lpdA)
   00380 Tryptophan metabolism
    DK843_12230 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DK843_12230 (lpdA)
   00670 One carbon pool by folate
    DK843_12230 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:chrb04147]
    DK843_12230 (lpdA)
Enzymes [BR:chrb01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DK843_12230 (lpdA)
Exosome [BR:chrb04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DK843_12230 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored GIDA Pyr_redox_3 Thi4 NAD_binding_8 FAD_binding_2 Biotin_lipoyl_2 FAD_binding_3 HI0933_like AlaDh_PNT_C GCV_H Lycopene_cycl
Other DBs
NCBI-ProteinID: AXE34997
UniProt: A0A344UI99
LinkDB
Position
complement(2534095..2535894)
AA seq 599 aa
MSNLIELKVPDIGGHNNVDVIEVFVKPGDVIEKEASLITLETDKATMEVPAEAAGTVKEV
RVAVGDKVSEGDVVVILEAAGAAAAAPAEVKPVETTGVASATTQAGFAPQAAPVAASHSG
GADIECDVMVLGGGPGGYSAAFRAADLGLKVVIVERYATLGGVCLNVGCIPSKALLHNAA
VIDEVSHLAANGIKFGKPEVDIDMLRGYKEKVIAKLTGGLGGMAKARKVEIVRGNGHFID
PHHIEVSVTTGQGREESGEKKIVKFKNAIIAAGSRVVKLPFIPNDPRVVDSTGALELKGV
ADRMLIIGGGIIGLEMGTVYSTLGARLDVVEMLDGLMQGADRDLVKVWQKWNAHRFDNIM
LNTKTVAVEPKEDGVWVTFEGAQAPKEPQRYDLVLYATGRAPNGKLIGAENAGIAVTDRG
FIQVDKQQRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAENCAGQKAYFDARVIPGVAYT
DPEVAWVGVTEDEAKKQGLKIEKGVFPWAASGRAIANGRDEGFTKLIFDAESHQIIGGGI
VGPHAGDMIGEVCLAIEMGCDATDIGKTIHPHPTMGESIGMAAEVAHGTCTDLPPQRKK
NT seq 1800 nt   +upstreamnt  +downstreamnt
atgagcaatctgatcgaattgaaagtcccggacatcggcggccacaacaacgtggacgtg
atcgaagtgttcgtcaaaccgggcgacgtgattgaaaaagaagccagcctgatcacgctg
gaaaccgacaaggccaccatggaagtgccggccgaagccgccggcaccgtcaaggaagtg
cgcgtcgccgtgggcgacaaagtctccgagggcgatgtggtcgtcatcctagaagccgcc
ggcgcagccgccgcggctccggctgaagtgaagccggtggaaaccaccggcgtcgcctcc
gccaccacccaagccggcttcgcgccgcaagccgctccggtcgccgccagccatagcggc
ggcgccgacatcgaatgcgacgtgatggtgctgggcggcggccccggcggttactccgcc
gccttccgcgcggccgacctgggcctgaaagtggtcatcgtcgagcgctacgccaccctg
ggcggcgtgtgcctgaacgtgggctgcatcccgtccaaggcgctgctgcacaatgcggcg
gtgatcgacgaagtgagccacctggccgccaacggcatcaagttcggcaagccggaagtg
gacatcgacatgctgcgcggctacaaggaaaaggtcatcgccaagctgaccggcggcctg
ggcggcatggccaaggcgcgcaaggtggagatcgtgcgcggcaacggccacttcatcgat
ccgcaccacatcgaagtctctgtgaccaccggccagggccgcgaagaatcgggcgagaag
aagatcgtcaagttcaagaacgccatcatcgccgccggctcccgcgtggtgaagctgccg
ttcatcccgaacgacccgcgcgtggtggactccaccggcgcgctggagctgaagggcgta
gccgaccgcatgctgatcatcggcggcggcatcatcggcctggaaatgggcaccgtctac
tccacgctgggcgcgcgcctggacgtggtggaaatgctggacggcctgatgcaaggcgcc
gaccgcgatctggtcaaggtatggcagaagtggaacgcccaccgtttcgacaacatcatg
ctgaacaccaagaccgtggccgtggagccgaaggaagacggcgtgtgggtgactttcgaa
ggcgcgcaagccccgaaagagccgcaacgctacgacctggtgctgtacgccaccggccgc
gcgccgaacggcaagctgatcggcgcggaaaacgccggcatcgcggtgaccgaccgcggc
ttcatccaggtggacaagcagcagcgcaccaatgtgccgcacatcttcgccatcggcgac
atcgtcggccagccgatgctggcgcacaagggcgtgcatgaaggccatgtggcggcggaa
aactgcgctggccagaaggcctacttcgacgcccgcgtgattccgggcgtggcctacacc
gatccggaagtggcctgggtgggcgtgaccgaagacgaagccaagaagcaaggcctgaag
atcgagaagggcgtgttcccgtgggccgcctccggccgcgccatcgccaacggccgcgac
gaaggcttcaccaagctgatcttcgatgccgaaagccaccagatcatcggcggcggcatc
gtaggcccgcacgcgggcgacatgatcggcgaggtgtgtctggcgatcgagatgggttgc
gacgcgaccgacatcggcaagaccatccacccgcacccgacgatgggcgagtccatcggc
atggcggcggaagtggcgcacggcacctgcacggacctgccgccgcaacgcaagaagtaa

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