Chromobacterium phragmitis IIBBL 274-1: DK843_12300
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Entry
DK843_12300 CDS
T05744
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb02010
ABC transporters
chrb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DK843_12300
03070 Bacterial secretion system
DK843_12300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chrb02000
]
DK843_12300
02044 Secretion system [BR:
chrb02044
]
DK843_12300
Transporters [BR:
chrb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DK843_12300
Secretion system [BR:
chrb02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
DK843_12300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_29
AAA_22
ABC_ATPase
AAA_16
AAA_21
TniB
NB-ARC
SbcC_Walker_B
MeaB
AAA_25
Coatamer_beta_C
AAA_18
DUF87
Motif
Other DBs
NCBI-ProteinID:
AXE35010
UniProt:
A0A344UIB2
LinkDB
All DBs
Position
complement(2556784..2558928)
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AA seq
714 aa
AA seq
DB search
MSDPISGQAAAGALAPDHGLLGLVLLAQFHGIAADPEQLSHQFGRSAEPFSETDLLLAAK
HLELKAKIVQQPLDRIGLMALPALALAANGEHFIVARCDGDKVLIHDLKQGRPAVLSLDE
LAARYDGRLLVVASRASAAGALVKFDFTWFVPAIVKYRKLLLEVLGVSFVLQLFALVTPL
FFQVVMDKVLVNRAFNTLDVIAVGLLALSVFNVVLSALRGHVFAHTTSRIDVELGARLFR
HLLALPLAYYEARRVGDTVARVRELDSIRNFLTGQALTTVLDLLFSFVFLAVMFYYSGWL
TLIVVISLPCYAAWSALLTPVLRRRLDEKFARGADNQSFLVESVGGIGTIKSMAVEPHMT
RRWDNQLAAYVAAGFRVTRLANIGQNGVQLIQKLVTVATLWLGAKLVIGGDLSVGQLIAF
NMLAGQVAAPVVRLAQLWQDFQQVGISVERLGDILNTRTELPASRAALPPIQGKIEFDQV
VFRYRPDGPEILRKLSLDIRAGEVVGIVGRSGSGKSTLTKLVQRLYVPESGRVLVDGNDL
ALADPAWLRRQIGVVLQENLLFNRSVRDNIALSDPGMSLDAVIRAAKLAGAHDFIMELAE
GYDTMVGEHGVSLSGGQRQRIAIARALVCNPRILILDEATSALDYESERAVMQNMRAICQ
GRTVLIIAHRLSTVRGAHRIIAMDKGVIVEAGSHAELAQKPGGYYAHLHSLQQG
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcctattagcggccaagccgcggcgggggcattagcgccggaccacggcttg
ctcggcctggtgctgctggcccagtttcacggcattgccgccgaccccgagcagctttcc
caccaattcggccgctccgccgaacccttctccgaaaccgatctcctcctcgccgccaag
catctggaactgaaggccaagatcgtccagcagccgctggaccgcatcggcctgatggcc
ttgccggcgctggcgctggcggccaatggcgagcacttcatcgtcgcccgctgcgacggc
gacaaagtcttgatccacgatctgaagcagggccgtcccgcggtgttgagcctggacgag
ctggcggcgcgctacgacggccggctgctggtggtcgcctcgcgcgcgtcggcggcgggg
gccttggtcaagttcgatttcacctggttcgtgccggccatcgtcaagtaccgcaagctg
ctgctggaggtgctgggcgtgtcctttgtgctgcagctgttcgcgctggtgacgccgctg
ttcttccaggtggtgatggacaaggtgctggtcaatcgcgccttcaataccctggacgtg
atcgccgtcggcctgttggcgctgtcggtgttcaatgtggtgttgtccgccttgcgcggc
cacgtgttcgcccacaccaccagccggatcgacgtggagctgggcgcgcgcttgttccgc
catctgctggcgctgccgctggcctattacgaggcgcgccgcgtcggcgatacggtggcg
cgggtgcgcgagctggacagcatccgcaacttcctcaccggccaggcgctgaccacggtg
ctggacctgctgttctccttcgtgttcctggcggtgatgttctattacagcggctggctg
acgctgatcgtggtgatctcgctgccgtgctacgccgcctggtcggcgctgttgacgccg
gtgctgcgccggcggctggacgagaagttcgcccgcggcgccgacaaccagtcctttctg
gtggagtcggtgggcggcatcggcaccatcaagtcgatggcggtggagccgcacatgacg
cggcgctgggacaaccagctggcggcctacgtggccgccggcttccgggtgacgcggctg
gccaatatcggccagaacggcgtgcagctgatccagaagctggtgacggtggccaccttg
tggctgggggccaagctggtgatcggcggcgatctgtcggtcggccagctgatcgccttc
aatatgctggccggccaggtggcggcgccagtggtgcgcctggcccagctgtggcaggac
ttccagcaggtgggcatctcggtggagcggctgggggacatcctcaacacccgcaccgag
ctgccggccagccgcgcggcgctgccgcccatccagggcaagatcgagttcgaccaagtg
gtgttccgctaccgcccggacggtccggagatcctgcgcaagctgagcctggacatccgc
gccggcgaggtggtgggcatcgtcggtcgctccggttccggcaagagcacgctgaccaag
ctggtgcagcggctgtacgtgccggaatccggccgcgtgctggtggacggcaacgacctg
gccctggccgatccggcctggctgcgccgccagatcggcgtggtgctgcaggagaatctg
ctgtttaaccgcagcgtgcgcgacaacatcgcgctgtccgatccgggcatgtcgctggac
gcggtaatccgcgccgccaagctggccggcgcccacgatttcatcatggagttggccgag
ggctacgacaccatggtcggcgaacatggcgtcagcctgtccggcggccagcgccagcgc
atcgccatcgcccgcgcgctggtctgcaacccgcgcatcctgatcctggacgaggccacc
agcgccttggactacgagtctgagcgcgcggtgatgcagaacatgcgcgccatctgccag
ggtcgcaccgtgctgatcatcgcccaccgcctgtccaccgtgcgcggcgcccaccgcatc
atcgcgatggacaagggcgtgatcgtcgaagccggcagccacgccgagctggcgcagaaa
ccgggcggctattacgcccacctccacagcctgcagcaaggataa
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