Chromobacterium phragmitis IIBBL 274-1: DK843_12945
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Entry
DK843_12945 CDS
T05744
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chrb03009
]
DK843_12945
Enzymes [BR:
chrb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
DK843_12945
Ribosome biogenesis [BR:
chrb03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DK843_12945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF4423
Motif
Other DBs
NCBI-ProteinID:
AXE35115
UniProt:
A0A344UIL7
LinkDB
All DBs
Position
complement(2693234..2693938)
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AA seq
234 aa
AA seq
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MELYRLLQQQGFGGRKECRQLIEYGLVEVNGEVVDNYRAQFELADIASLAVDDEPWPLVR
GPLYLLLHKPANYETSHKPNCHPSIYRLLPDQFSNLDISAVGRLDVDTTGLILLSNDGQF
IHALSSPKKLVPKVYRATLKHEATPELIAKLQSGVYLNDEAREFAADSVEQIDAHTILLT
ITEGKYHQVKRMVAAASNRVEALHRESLGAIVLGELPAGEWRQLTSAELAAFGF
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggaactctatcgactgttgcaacaacaaggcttcggcggccgcaaggaatgccgccag
ctgatcgaatacggactggtggaagtgaacggcgaggtggtggacaactaccgcgcccag
ttcgagctggccgacatcgccagcctggcggtggacgacgagccgtggccgctggtgcgc
ggcccgctgtatctcttgctgcacaagccggccaattatgaaacctcgcacaagccgaac
tgccatcccagcatctaccggctgttgccggaccagttttccaatctggacatcagcgcg
gtggggcggttggacgtggacaccaccgggctgatcctgttgtccaacgacggccagttc
atccacgcgctttcctcgcccaagaaactggtgcccaaggtctaccgcgccacgctgaag
cacgaggcgacgccggagctgatcgccaagctgcagagcggcgtctatctgaacgacgag
gcgcgcgagttcgcggccgacagcgtggagcagatcgacgcccacaccattctgctgacc
atcaccgagggcaagtaccaccaggtgaagcggatggtggcggcggccagcaaccgggta
gaagccttgcaccgcgaaagcctgggcgccatcgtcctgggcgaactgccggcgggcgag
tggcggcagttgactagcgcagaattggcggccttcggcttctga
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