Chromobacterium phragmitis IIBBL 274-1: DK843_13745
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Entry
DK843_13745 CDS
T05744
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DK843_13745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrb03400
]
DK843_13745
Enzymes [BR:
chrb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DK843_13745
DNA repair and recombination proteins [BR:
chrb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DK843_13745
Prokaryotic type
DK843_13745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AXE35261
UniProt:
A0A344UJ13
LinkDB
All DBs
Position
2856271..2856993
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AA seq
240 aa
AA seq
DB search
MPSLNYLAPAFARVHPDWEAVLRQPAIAARLADIDRQLAQQSEAGKTLFPPAPQAFNALS
FASPADVKVVILGQDPYHGDGEAMGLSFSVPDGIRVPPSLRNIYKELAADLGLGVPAGGD
LTHWAQQGVLLLNSVFTVERDKAGSHGKLGWQTVSDALIDAVNRDNPGCVFLLWGNWAQT
KAERIDAGRHLVLTAAHPSPLSASRGFHGCRHFSQVNAWLIARGRQPVRWAAPAAQNSLF
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgccttcactgaactacctcgccccagccttcgcccgcgtccacccggattgggaggcc
gtgctgcgccagcccgccatcgccgcccgcctggccgacatcgaccgccagctggcccag
cagagcgaggccggcaaaaccctgtttcccccggcgccgcaggccttcaacgcgctgagc
tttgcctcgccggccgacgtcaaggtggtgatcctaggccaagacccctaccacggcgac
ggcgaggcgatgggcctgtcgttctcggtgccggatggcatccgcgtgccgccgtcccta
cgcaacatttacaaggagctggcggccgatctgggcctgggcgtgccggccggcggcgat
ctcacccactgggcgcagcagggcgtgctgctgctcaacagcgtgttcaccgtcgagcgc
gacaaggccggcagccatggcaagctgggctggcaaaccgtcagcgacgcgctgatcgac
gccgtcaaccgcgacaaccccggctgcgtgttcctgctgtggggcaattgggcgcagacc
aaggccgaacgcatcgacgccggccgccacctggtgctgaccgccgcccacccttccccc
ttgtccgccagccgaggcttccacggctgccgccacttctcccaggtcaatgcctggctg
atcgcgcgcggccgccagccggtgcgctgggccgcccccgccgcgcaaaacagcctgttt
tga
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