Chromobacterium phragmitis IIBBL 274-1: DK843_14135
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Entry
DK843_14135 CDS
T05744
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chrb03019
]
DK843_14135
03009 Ribosome biogenesis [BR:
chrb03009
]
DK843_14135
Messenger RNA biogenesis [BR:
chrb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DK843_14135
Ribosome biogenesis [BR:
chrb03009
]
Prokaryotic type
rRNA processing factors
DK843_14135
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
AXE37026
UniProt:
A0A344UP28
LinkDB
All DBs
Position
2930023..2931519
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AA seq
498 aa
AA seq
DB search
MLHQSIPLPRDLPRPQEQILVNITPQETRVAVLEDGVVQELHVERAASRGIVGNIYLGQV
KRVLPGMQSAFIEIGLERAAFLHIADVLEQRQHPTEPQRIEKMLFEGQTVLVQVIKDPIG
TKGARLSTQISLAGRFLVHLPQEEHIGVSQKIESDAERHSLKARLEKLLPADSPRGYIIR
TSAETARDDELAADIGYLSKLWSDIRQKSQTLPAQSLLYEDLPLAVRVLRDMVSGYTDKV
LVDSNENYGRMVEFAEQYVQIAVDKIERYAGERPLFELHGIEAEIDKALARRVNLKFGGY
LIVDQTEAMTTIDVNTGGFVGNRNFDETIFKTNLEATQVIARQLRLRNLGGIVIVDFIDM
DNDEHQAAVLAELAKAMARDRTRVTLNGFTSLGLVEITRKRTRESLAHILCEPCPTCQGR
GEIKTAQTVCYEVQREIVREARQYDAKGYRILAAQSVIDMFLDEESQSLAMLVDFIGKPV
SLSVESSYTQEQFDVVLL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatcaatcgataccgctgccgcgcgatctgccgcggccgcaagaacaaatcctg
gtcaacatcacgccgcaggaaacccgcgtcgcggtgctggaagacggcgtggtgcaggaa
ctgcacgtggagcgcgccgccagccgcggcatcgtcggcaacatctacctgggccaggtg
aagcgcgtactgccgggcatgcagagcgccttcatcgagatcggcctggagcgcgccgcc
ttcctgcacatcgccgacgtgctggagcagcgccagcaccctaccgagccgcaacgcatc
gagaagatgctgttcgaaggccagaccgtgctggtgcaggtgatcaaggacccgatcggc
accaagggcgcgcggctgtcgacgcagatttcgctggccggccgcttcctggtgcacctg
ccgcaggaagagcacatcggcgtgtcgcagaagatagaaagcgacgccgagcgccatagc
ctgaaggcgcggctggaaaagctgctgccggcggacagcccccggggctacatcatccgc
accagcgccgaaaccgcccgcgacgacgagctggccgccgacatcggctacctcagcaag
ctgtggtccgacatccggcagaagtcgcagaccctgccggcgcaaagcctgctgtacgaa
gacctgccgctggcggtgcgggtgctgcgcgacatggtcagcggctacaccgacaaggtg
ctggtggactccaacgagaactacggccgcatggtggagttcgccgagcagtacgtgcag
atcgccgtcgacaagatcgagcgctacgccggcgagcggccgctgttcgagctgcacggc
atcgaggccgagatcgacaaggcgctggcgcgccgcgtcaatctgaagttcggcggctac
ctgatcgtcgaccagaccgaagcgatgacgacgatagacgtcaacaccggcggcttcgtc
ggcaaccgcaatttcgacgaaaccatcttcaagaccaatctggaagccacccaggtgatc
gcccgccagctgcggctgcgcaatctgggcggcatcgtcatcgtcgacttcatcgacatg
gacaacgacgagcaccaggcggcggtgctggccgagctggccaaggcgatggcccgcgac
cgcacccgggtgacgctgaacggcttcaccagcctgggcctggtggaaatcacccgcaag
cgcacccgcgagagcctggcccacatcctgtgcgagccctgccccacctgtcagggccgc
ggcgagatcaagacggcgcaaacggtgtgctacgaggtgcaacgcgagatcgtgcgcgag
gcgcggcagtacgacgccaagggctaccgcatcctggcggcgcagtcggtgatcgacatg
ttcctggacgaggagtcgcagagcctggcgatgctggtggacttcatcggcaagccagtg
tcgctgtcggtggagtccagctacacccaggagcagttcgacgtggtgttgttgtga
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