Chromobacterium phragmitis IIBBL 274-1: DK843_15535
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Entry
DK843_15535 CDS
T05744
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrb03032
]
DK843_15535
03400 DNA repair and recombination proteins [BR:
chrb03400
]
DK843_15535
Enzymes [BR:
chrb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DK843_15535
DNA replication proteins [BR:
chrb03032
]
Prokaryotic type
DNA Topoisomerases
DK843_15535
DNA repair and recombination proteins [BR:
chrb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DK843_15535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Motif
Other DBs
NCBI-ProteinID:
AXE35597
UniProt:
A0A344UJZ9
LinkDB
All DBs
Position
complement(3255177..3257486)
Genome browser
AA seq
769 aa
AA seq
DB search
MPTSLLIVESPSKAKTLKKYLGPDFEVLASYGHVRDLVPKNGAVDPEKDFAMKYQLIARN
SKHVDAIVSAVREADHVYLATDPDREGEAISWHLVQILNSKKLLKDKTAQRVVFHEITKN
AVLDAIQNPRDIAQDLVDAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIC
ERENEIKAFVQQEYWSVHLDSHKSRTKFSAKLTQLAGKKLDQFDIPNEAEQASVLARLQG
LPATVGSIEKKKKSRSPAAPFTTSTLQQEAVRKLGMTTDRAMRTAQQLYEGMDIGQGTVG
LITYMRTDSVALANEAVEEIRGYIGLKWDADFLPKNPAVYKSKAKNAQEAHEAIRPTSIL
RTPEMVKPFLTTDQFKLYDMIWKRTLACQMAPAKFDTTSVDILVGEGVFRASGQVQTFAG
FLAVYEEDVDDAEDEDNAKLPLLTEGEDLPVDKLYGDQHFTQPPPRFSEASLVKALEEFG
IGRPSTYASIISTLKDREYVILDKKRFLPTDTGDIVNKFLTEHFAQYVDYNFTAKLENQL
DEIANGGRQWVPVMDSFWKGFKKQIDEKESISRAEVTTESLDEACPKCGKPLSIKFGKRG
RFIACTGYPDCDYTRNMGETAEQAAEEAEAPTVIEGRSCPDCGGELHIKKGRYGKFIGCA
NYPKCKHIEPLEKPRETGVTCPECKTGQLIERKSRYGKLFYSCNTYPKCKYATWNPPIAE
PCPKCNWPILTIKTTKRRGTEKVCPQKECGYAEQIAPPEGKEAVPAEEA
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccagcctcctgatcgttgaatcgccgtccaaggcgaaaacgctgaaaaaatac
ctgggcccggacttcgaggtcctggcctcctacggccacgtgcgcgacctggtgccgaaa
aacggcgccgtcgatccggaaaaagacttcgcgatgaagtaccaactgatcgcgcgcaac
agcaagcacgtggacgccatcgtcagcgcggtgcgcgaggccgaccacgtctacctggcg
actgacccggaccgcgaaggcgaggccatttcctggcacctggtgcaaatcctcaacagc
aagaagctgctgaaggacaagaccgcccagcgcgtggtgttccacgaaatcaccaagaac
gcggtgctggacgccatccagaacccgcgcgacatcgcgcaggacctggtggacgcccag
caggcgcgccgcgcgctggactatctggtgggcttcaacctgtcgccgctgctgtggaag
aaaatccgccgcggcctgtccgccggccgcgtgcaaagcccggcgctgcgactgatctgc
gagcgcgagaacgagatcaaggccttcgtgcagcaggaatactggtcggtgcacctggac
agccacaagagccgcaccaagttcagcgccaagctgacgcagctggccggcaagaagctc
gatcagttcgacatccccaacgaggccgagcaagcttcggtgctggcgcgcctgcaaggc
ctgccggccaccgtgggcagcatcgaaaagaaaaagaaatcgcgcagccccgccgcgccg
ttcaccacctccaccttgcagcaggaagccgtgcgcaagctgggcatgaccaccgaccgc
gcgatgcgcaccgcgcagcagctgtacgagggcatggacatcggccagggcaccgtcggc
ctgatcacctatatgcgtaccgactcggtggcgctggccaatgaggcggtggaggaaatc
cgcggctacatcggcctgaaatgggatgccgacttcctgccgaaaaacccggcggtgtac
aagagcaaggccaagaacgcccaggaagcgcacgaagccatccgcccgacctccatcctg
cgcacgccggaaatggtcaagcccttcctgaccaccgaccagttcaagctgtacgacatg
atctggaagcggacgctggcctgccagatggcgccggccaagttcgacaccaccagcgtg
gacatcctggtgggcgaaggcgtgttccgcgccagcggccaggtgcagactttcgccggc
ttcctcgccgtgtacgaggaagacgtggatgacgccgaggacgaagacaacgccaagctg
ccgctgctgaccgaaggcgaagacctgccggtggacaagctgtacggcgaccagcacttc
acccagccgccgccgcgcttctccgaagcgtccctggtgaaggcgctggaagagttcggc
atcggccggccctccacctacgccagcatcatctcgacgctgaaggaccgcgaatacgtg
atcctggacaagaagcgcttcctgcccacggacaccggcgacatcgtcaacaaattcctg
accgagcacttcgcgcagtacgtcgactacaacttcaccgccaagctggaaaaccagctg
gacgagatcgccaacggcggccgccagtgggtgccggtgatggacagcttctggaagggc
ttcaagaagcagatcgacgagaaggaaagcatttcccgcgccgaagtcaccaccgaaagc
ctggacgaggcctgcccgaaatgcggcaagccgctgtcgatcaagttcggcaagcgcgga
cgcttcatcgcctgcaccggctacccggattgcgattacacgcgcaatatgggcgagaca
gcggagcaggcggcggaagaagccgaagcgccgaccgtgatcgaaggccgctcttgcccg
gactgcggcggcgagctgcacatcaagaagggccgctacggcaagttcatcggctgcgcc
aactaccccaagtgcaagcacatcgaacccttggaaaagccgcgcgaaaccggcgtcacc
tgcccggaatgcaagaccggccagctgatcgagcgcaagagccgctacggcaagctgttc
tacagctgcaacacttatcccaagtgcaagtacgcgacctggaacccgccgatcgccgaa
ccgtgcccgaagtgcaactggccgatcctgacgatcaagaccaccaagcgccgcggcacc
gagaaggtgtgcccgcagaaggaatgcggctacgccgagcagatcgcgccgccggaaggc
aaggaagccgtccccgccgaagaggcgtga
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