Chromobacterium phragmitis IIBBL 274-1: DK843_16615
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Entry
DK843_16615 CDS
T05744
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DK843_16615 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrb03400
]
DK843_16615 (recC)
Enzymes [BR:
chrb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DK843_16615 (recC)
DNA repair and recombination proteins [BR:
chrb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DK843_16615 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AXE35783
UniProt:
A0A344UKI5
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All DBs
Position
3451608..3454805
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AA seq
1065 aa
AA seq
DB search
MLFLYQSNRLEQLGELFRGMTQAMPLADPFVAETVIVQSRGMGRWITLDLARKAGVAANI
DFALPAAFAWRLMQKVMPDLPKKSAFVPEVLAWRLLALLPRLEGEPFEPVIHYLRGGEAA
AFELAGKIADIFDQYLVFRPDWIRAWEAGVLLGLGEDEAWQAALWRALADSDPGRHRVRM
LDQFFSALKTEHLPQRVTLFGIASLAPMYLALVKRLAELTDVCLFTLNPCEAYWGDIVDA
RRMLKLRQAGDLFATQGHPLLASLGKQGRDFFELIAEDAELDAKPLFAAPKGDSLLARLQ
RDILQLNDPAQLPRAYDPADDSVEVHACHGAMRELETLKDRLLAMFAADPRLSPADVAVL
TPDINAYAPYIDAVFGRRGDAPNIPYGIADRRVEREQPLLSTFAAVLKLADSRFAADEVL
ALLDCPALLARFGLADADLGFIQDWVRGAGIRWGRDAAHKTALGLPAEPAYTWRWGLDRL
LLGTVLPPALAGDEAGLFAGLLPHTAAQGQLGETLARFADFYDALDALAREWARPAAPAV
WAQRFHWACDALFLAEGDDEAALELLREAFGELAEDAELAGFEQKAGLAVARDWLLRKLS
LSSSQGFLSGGVTFCAMVPMRSIPFQALCLIGMNDGAYPRDERPVSFDLVARNPRRGDRS
RRFDDRYLFLEAILSARGKLYLSYVGQSARSGEPLPPSPLVSELLDTLSAMCGEDMAARL
TLRHPLQPFSPRAFDGGDARLASFEPAFAAALAAPPAEPAPFIAPLPDEAAAMVANLHDF
IRFWQNPARAWLADRLALRVAYQGEAQPAREPFAMARDASRALRRQLVEAMLHGKPPMPV
RQRVAAAGLLPTGALGQAWLQEEGRASLRLAGRLPGALREEPLPPQPVHLEIAGFTLVGE
LYGLRPEGRLDFIVGKMNAAQRVALWLSHLILCAARPPGIACHSACYDDAGNTVLRDEID
AAGLLAPWLVRWQQGQAQPLPFFGRTSWAYAEALAKAPENREKALAAAWQKWEPNFIQGD
GIAQKDEPPIALAFRHQDPLEDPLFAQLAETLLLPLAERLLGDGA
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcctctatcaatccaaccgactcgagcaactgggcgaattgttccgcggcatg
acccaggcgatgccgctggccgaccccttcgtcgccgagaccgtcatcgtgcagagccgg
ggcatggggcgctggatcacgctggacctagcgcgcaaggcgggcgtggcggccaatatc
gacttcgcgctgccggccgccttcgcctggcggctgatgcagaaagtgatgccggacctg
ccgaagaagtccgctttcgtgcccgaagtgctggcctggcggctgctcgccctcctgccg
cggctggagggcgagcctttcgagccggtcatccattatctgcggggcggcgaggcggcg
gccttcgagctggccggcaagatcgccgacatcttcgaccaatacctggtgttccgcccc
gactggatacgcgcctgggaggccggcgtgctgctgggcctgggcgaggacgaagcctgg
caggctgcgctgtggcgggcgctggccgacagcgatcccggccgccaccgcgtgcgcatg
ctggaccagttcttctccgcgctgaaaacagaacacttgccgcagcgggtgacgctgttc
ggcatcgccagcctggcgccgatgtacctggccctggtcaagcgcctggccgagctgacc
gacgtctgcctgttcacgctgaatccatgcgaagcctactggggcgacatcgtcgacgcg
cgccgcatgctcaagctcaggcaagccggcgacctgttcgccacccagggccatccgctg
ctggcgtccctgggcaagcaggggcgggactttttcgagctgatcgccgaagacgccgag
ctggacgccaagccgctgttcgccgcgcccaagggcgacagcctgctggcccggctgcag
cgcgacatcctgcagctcaatgatccggcgcagctgccgcgtgcgtacgatccggccgac
gactcggtcgaggtgcacgcctgccacggcgcgatgcgcgagctggaaacgctgaaggac
cggctgctggcgatgttcgcggccgaccccaggctcagcccggccgacgtggcggtgctg
acgccggacatcaacgcctacgcgccctacatcgacgcggtgttcggccgccgcggcgac
gcgcccaacatcccctacggcatcgccgaccgccgggtcgagcgcgagcagccgctgctg
tccaccttcgccgccgtgctgaagctggccgactcccggttcgccgccgacgaggtgctg
gcgctgctggactgtccggcgctgctggcgcgcttcggcctggccgacgccgatctcggc
ttcatccaggactgggtgcgcggcgccggcatccgctggggccgcgacgccgcgcacaag
acggcgctgggcctgccggccgagcccgcctacacctggcgctgggggctggaccggctg
ctgctgggcaccgtgttgccgccggcgctggctggcgacgaggccggcctgttcgccggc
ctgttgccgcacaccgccgctcagggccagctgggcgagacgctggcgcgcttcgccgat
ttttacgacgcgctggacgccttggcgcgcgaatgggcgcggccggcggcgccggcagtt
tgggcgcagcgcttccactgggcctgcgacgcgctgttcctggccgaaggcgacgacgaa
gccgcgctggagctgctgcgcgaggccttcggcgaactggccgaagacgccgagctggcg
gggttcgaacaaaaggcgggcctggcggtggcgcgcgactggctgctgcgcaagctgtcg
ctgtcgtccagccagggttttctgtccggcggcgtgaccttctgcgccatggtgccgatg
cgctcgataccgttccaggcgctgtgcctgatcggcatgaacgacggcgcctacccgcgc
gacgagcggccggtcagcttcgacctggtggcccgcaatccgcgccgcggcgaccgctcg
cgccgcttcgacgaccgctatttgtttctggaggctatcctgtcggcgcgcggcaaactg
tatctgtcctatgtcggccagtcggcgcgcagcggcgagccgctgccgccgtcgccgctg
gtgtccgagctattggacacgctgtcggcgatgtgcggcgaggacatggcggcgcggttg
acgctgcgccacccgctgcagccgttctcgcccagggccttcgatggcggcgatgcgcgg
ctggccagcttcgagccggccttcgccgccgcgctggccgcgccgccggccgaacccgcg
cccttcatcgcgccgctgccggacgaggcggcggcgatggtggccaatctgcacgatttc
atccgcttctggcagaacccggcgcgggcctggctggcggaccggctggcgctgcgcgtc
gcctaccagggcgaggcgcagccggcgcgggagccgttcgcgatggcgcgcgacgccagc
cgcgcgctgcgccgccaactggtggaggccatgctgcacggcaagccgccgatgccggtg
cgccagagggtggccgccgccggcttgttgcccaccggggcgttgggccaggcctggctg
caggaggaggggcgcgccagcctgcgcctggcaggcaggctgccgggcgcgttgcgggaa
gagccgctgccgccgcagccagtgcatctggagatcgcgggcttcaccctggtgggcgag
ctgtacggcctgcggccggagggacggctggatttcatcgtcggcaagatgaatgccgcc
cagcgcgtcgcgttgtggctgagccatttgatcctgtgcgcggcgcggccgccgggcatc
gcctgccacagcgcctgttatgacgacgccggcaataccgtgctgcgcgatgagatcgac
gccgccggcctgctggcgccgtggctcgtccgctggcaacagggccaggcccagcccttg
cccttcttcggccgcaccagctgggcctatgccgaggcgctggccaaagcgcctgaaaac
cgcgaaaaagcattggccgccgcctggcagaagtgggagcccaatttcatccagggcgac
ggcatcgcgcagaaggacgagccgccgatcgcgctggccttccgtcatcaagacccgctg
gaggatccgctgttcgcccagttggcggaaacgctgctgctgccgttggcggaacggctg
ctgggagacggggcatga
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