Chromobacterium phragmitis IIBBL 274-1: DK843_16810
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Entry
DK843_16810 CDS
T05744
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb00330
Arginine and proline metabolism
chrb01100
Metabolic pathways
chrb01110
Biosynthesis of secondary metabolites
Module
chrb_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
DK843_16810
Enzymes [BR:
chrb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
DK843_16810
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AXE35818
UniProt:
A0A344UKM0
LinkDB
All DBs
Position
complement(3494887..3497145)
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AA seq
752 aa
AA seq
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MRFHFPIVIIDEDFRSENTSGSGIRELAAAMEAEGMSVIGYTSYGDLTSFAQQQSRAAGF
ILSIDDEEFQTEDTAQQALGNLYGFVAEIRRRNPDIPVYLYGETRTARHIPNDILRELHG
FIHMHEDTPEFVARHIIREAKSYLDNLAPPFFRALVDYAYDGSYSWHCPGHSGGVAFLKS
PVGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNAARIFNADHLFFVTNGTS
TSNKIVWHSCVAAGDIVLVDRNCHKSNLHAIIMTGAIPVFLMPTRNHYGIIGPIPKSEFQ
PDTIKKKILANPFAREMLEKHPNRKPRILTLTQSTYDGILYNVEEIKGLLDGEVDTLHFD
EAWLPHACFHDFYRDFHAIGEGRQRCEDSLVFSTQSTHKLLAGISQASQILVQDPQNRQL
DTAWFNEAYLMHTSTSPQYSIIASCDVAAAMMEQPGGQSLVEESLVEAMEFRRAMRKVDE
EYGRDWWFSVWGPDDLSDDGICDQADWTLRPDERWHGFAGIEDGFNMLDPIKATVLTPGL
DVDGSFEEMGIPAAIVTKYLTEHGVVVEKTGLYSFFIMFTIGITKGRWNTLISLLQQFKD
DFDKNQPMWRVMPEFVAKYPQYERVGLQDLCQRIHGLYAKHDVARLTTDIYLSDMEPAMR
PADAFAKMAHREIERVPVDQLEGRVTAVLLTPYPPGIPLLIPGERFNKTIVDYLRFAQAF
NRELPGFETDVHGLVAVEVQDRKVYCVDCVKQ
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttcacttccccatcgtgatcatcgacgaggatttccgctcggaaaacaccagc
ggctccggcatccgcgaactggccgccgccatggaggcggaaggcatgagcgtgatcggc
tacaccagctacggcgatctcacctccttcgcccagcagcaaagccgcgccgccggcttc
atcctgtcgatcgacgacgaggagttccagaccgaggacaccgcgcagcaggcgctgggc
aatctgtacggtttcgtcgccgagatccgccgccgcaacccggacattccggtctacctg
tacggcgagacccgcaccgcgcgccacatccccaacgacatcctgcgcgagctgcacggc
ttcatccacatgcacgaggacacgccggagttcgtggcacgccacatcatccgcgaggcc
aagagctatctggacaacctggccccgccgttcttccgcgcgctggtggactacgcctac
gacggctcctactcctggcactgccccggccattccggcggcgtggccttcctgaagagc
ccggtgggccagatgttccaccagttcttcggcgagaacatgctgcgcgccgacgtctgc
aacgcggtggacgagctgggccagctgctggaccacaccggcccggtggcggcttccgag
cgcaacgccgcgcgcatcttcaacgccgaccacctgttcttcgtcaccaacggcacctcc
acctcgaacaagatcgtctggcacagctgcgtcgccgccggcgacatcgtgctggtggac
cgcaactgccacaagtcgaacctgcacgccatcatcatgaccggggccatcccggtgttc
ctgatgccgacgcgcaaccactacggcatcatcggcccgatcccgaagtccgagttccag
ccggacaccatcaagaagaagatcctggccaacccattcgcgcgcgagatgctggagaag
caccccaaccgcaagccgcgcatcctgacgctgacccagtccacctacgacggcatcctg
tacaacgtcgaggagatcaagggcctgctggacggcgaggtggacacgctgcatttcgac
gaagcctggctgccgcacgcctgcttccatgacttctaccgcgatttccacgccatcggc
gagggccgtcagcgctgcgaagacagcctggtgttctccacccagtccacccacaaactg
ctggccggcatcagccaggcttcgcaaatcctggtgcaggacccgcagaaccgccagctg
gacaccgcctggttcaacgaggcttatctgatgcacacctcgaccagcccgcaatactcg
atcatcgccagctgcgacgtggccgccgcgatgatggagcagccgggcggccaatcgctg
gtggaagagtccttggtggaggcgatggaattccgccgcgccatgcgcaaggtggacgag
gaatacggccgcgactggtggttcagcgtgtgggggccggacgacctgtccgacgacggc
atctgcgaccaggccgactggaccttgcgccccgacgaacgctggcacggcttcgccggc
atcgaggacggcttcaacatgttggacccgatcaaggccaccgtgctgacgccgggcctg
gacgtggacggcagcttcgaggaaatgggcatcccggccgccatcgtcaccaagtacctg
accgagcatggcgtggtggtggaaaagaccggcctgtacagcttcttcatcatgttcacc
atcggcatcaccaagggacgctggaacacgctgatctcgctgctgcagcaattcaaggac
gatttcgacaagaaccagccgatgtggcgggtgatgccggaattcgtcgccaaataccca
caatacgagcgcgtgggcctgcaggacctgtgccagcgcatccacggcctgtatgccaaa
cacgacgtagcgcgcctgaccaccgacatctacctgtccgacatggagccggcgatgcgc
ccggccgacgccttcgccaagatggcgcatcgcgagatcgagcgcgtgccggtggaccag
ctggaaggccgcgtcaccgcggtgctgctgacgccgtatccgccgggcatcccgctgctg
atcccaggcgagcgcttcaacaagaccatcgtcgactacctgcgcttcgcccaggccttc
aatcgcgagttgccgggcttcgaaaccgacgtccatggactggtcgccgtggaagtgcag
gaccgcaaggtgtactgcgtggattgcgtcaagcaataa
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