Chromobacterium phragmitis IIBBL 274-1: DK843_16840
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Entry
DK843_16840 CDS
T05744
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb00051
Fructose and mannose metabolism
chrb00541
Biosynthesis of various nucleotide sugars
chrb01100
Metabolic pathways
chrb01250
Biosynthesis of nucleotide sugars
Module
chrb_M01006
GDP-D-Rha4N biosynthesis, Fru-6P => GDP-D-Rha4N
chrb_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
DK843_16840 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DK843_16840 (gmd)
Enzymes [BR:
chrb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
DK843_16840 (gmd)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
ApbA_C
DUF6715
SCO5918
Motif
Other DBs
NCBI-ProteinID:
AXE35822
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All DBs
Position
3508441..3509562
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AA seq
373 aa
AA seq
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MSNKKVALITGITGQDGAYLAEFLLSKGYEVHGVKRRTSLFNTDRIDHLYQDPHDPDQRF
KLHYGDLTDSTNLIRIVQQVQPDEIYNLAAQSHVAVSFEEPEYTANADGVGALRLLEAIR
ILGLEKKTKFYQASTSELYGLVQEVPQKESTPFYPRSPYAVAKLYAYWITVNYREAYGMY
ACNGILFNHESPIRGETFVTRKITRAIARIALGLQDCLYLGNMSALRDWGHARDYVEMQW
LMLQQDKPEDFVIATGVQYSVRQFVEFAAAELGIAVDFEGEGAEEIGRVAAVSGDKAKCK
VGDVIVRVDPRYFRPTEVETLLGDPTRAAQKLGWTPRTTLRELVSEMVVSDYKAACRDHM
VKQAGFKAYDYNE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaagaaagtcgcccttatcaccggcattactggccaggacggcgcttatcta
gctgagttcctgctgtccaaaggctacgaggtgcatggcgtcaagcgacgcacgagtctt
ttcaataccgaccgcatcgatcacttgtatcaggatccccatgatcccgatcagcgcttc
aagctgcactacggcgacctgaccgactccacgaatctgattcgcatcgtccagcaagtg
cagcctgacgaaatctacaatctggcggcgcagagccatgtggctgtcagcttcgaggaa
cccgaatacaccgccaacgccgatggggtgggcgccctgcgtttgctggaggccatccgc
atcctgggtttggagaagaagaccaagttctaccaggcgagcacatccgagctttacggc
ctggtgcaggaagtgccgcagaaggaaagcacgccgttttatccgcgcagcccctatgct
gtggccaagctgtacgcctactggatcacggtgaactatcgcgaagcttacggcatgtac
gcctgcaatggcattttgttcaaccacgagagccctatccgcggggaaacgttcgtcacg
cgcaagatcacgcgcgccatcgcccgcatcgcgctgggtttgcaggactgtctctacctg
ggcaacatgagcgccctgcgagactgggggcatgcgcgcgactatgtcgaaatgcagtgg
ctgatgctgcagcaagacaagcccgaggacttcgtcatcgccaccggcgtgcagtactcg
gtgcgccagtttgtcgaattcgccgccgccgaactcggcatcgccgtggattttgaaggc
gagggcgcggaggagatcggccgcgtggcggccgtgagcggagacaaggccaagtgcaag
gtgggcgatgtcatcgtcagggtcgatccccgctatttccgtcccaccgaggtcgaaacg
ctgctgggcgatccgacgcgcgcggcgcagaagctgggctggacgcccaggaccacgctg
cgcgaattggtcagcgagatggtcgtgagcgattacaaggcggcctgccgcgatcacatg
gtcaagcaggccggtttcaaggcttacgactacaacgagtaa
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