KEGG   Chromobacterium phragmitis IIBBL 274-1: DK843_17150
Entry
DK843_17150       CDS       T05744                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
chrb  Chromobacterium phragmitis IIBBL 274-1
Brite
KEGG Orthology (KO) [BR:chrb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:chrb02044]
    DK843_17150 (tssC)
Secretion system [BR:chrb02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DK843_17150 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 DUF3386 Antimicrobial_7
Other DBs
NCBI-ProteinID: AXE35877
UniProt: A0A344UKS9
LinkDB
Position
3572242..3573720
AA seq 492 aa
MSAELQQQAAPAAADGVSLLDSIIEQSRIATNDSEKSHTRDLIGELVDQVLQGSVTVSRD
LSASIDARIAEIDQLISDQLNNVMHHAEFQKLEASWRGLNYLVMQSETSTQLKIKVLNAS
KKDLIKDFKAAAEFDQSALFKKIYEEEYGTFGGAPYAALVGDYEFTRHPEDFYLLDELSH
VAASAHAPLISSADPGLFGLESFSDIGKPRDLAKIFDTVEYAKWKSFRESEDSRYVGLVL
PHVLGRLPYGRDNVPVEAFDFEENVDGSNHDKYLWTNAAYAYAARLTDAFAQFGWLAAIR
GVEGGGLVEGLPAHTFKTDDGEVALKCPTEVAITDRTEKLLSDLGFISLVHCKNTDYAAF
FGGQSAQKAKTYNTDSANANARLSTQLPYIFAVSRIAHYMKSIMRDKIGSFASRQNVQDY
LNTWLAQYVLLDDSASQEAKAKYPLREARVDVVEVPGKPGVYRAAAFLRPHFQLDELTIS
LRLVAELPQPAG
NT seq 1479 nt   +upstreamnt  +downstreamnt
gtgagcgcggaattgcaacaacaggcggcgccggccgcggccgatggcgtcagtctgctc
gacagcatcatcgagcagagccgcatcgccaccaacgacagcgagaagagccatacccgc
gacctgatcggcgaactggtcgaccaggtgctgcaaggcagcgtcaccgtctcgcgcgac
ctgtcggccagcatcgacgcccgcatcgccgagatcgaccagttgatctccgatcaactg
aataacgtgatgcaccacgccgagttccaaaagctggaagcgtcctggcgcgggctgaat
tatctggtgatgcagtccgagaccagcacccagctgaagatcaaggtgctgaacgcgtcc
aagaaggatctgatcaaggacttcaaggccgcggccgagttcgaccagagcgcgctgttc
aagaaaatctacgaggaagagtacggcaccttcggcggcgcgccttacgccgcgctggtg
ggcgactacgaattcacccgccatccggaagacttctacttgctggacgagctgtcgcac
gtggccgcctccgcccacgcgccgctgatctcgtcagccgatccgggcctgttcggcctg
gaaagcttctccgacatcggcaagccgcgcgatctggccaagatcttcgacactgtcgaa
tacgcgaagtggaagtccttccgcgaatcggaagattcccgctacgtcggcttggtgctc
ccgcacgtgctgggccgcctgccgtacggccgcgacaacgtgccggtggaagcattcgac
ttcgaagagaacgtcgacggcagcaaccacgacaaatacttgtggaccaacgccgcctac
gcctacgcggcgcgcctgaccgacgccttcgcccaattcggctggctggccgccatccgc
ggcgtggagggcggcggcctggtggaaggcttgccggcccacaccttcaagaccgacgac
ggcgaagtggcgctgaagtgcccgaccgaggtggcgatcaccgaccgcactgaaaagctg
ttgtccgatctgggcttcatctcgctggtgcactgcaagaacaccgactacgccgccttc
ttcggcggccagtcggcgcagaaagccaaaacctacaacaccgactcggccaacgccaac
gcccggctgtcgacgcagctgccgtacatcttcgcggtatcccgcatcgcgcattacatg
aagtccatcatgcgcgacaagatcggcagcttcgcttcgcgccagaacgtgcaggactac
ctgaacacctggctggcccagtatgtgctgttggacgattccgccagccaggaagccaag
gccaagtatccgctgcgcgaagcgcgcgtcgatgtggtggaagtgccgggcaagccgggc
gtctaccgcgccgcggccttcctgcgtccccatttccagctcgacgagctgacgatttct
ttgcgtctggtggcagagctgccgcagccggcgggctaa

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