Chromobacterium phragmitis IIBBL 274-1: DK843_18095
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Entry
DK843_18095 CDS
T05744
Name
(GenBank) ethanolamine utilization protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb03030
DNA replication
chrb03430
Mismatch repair
chrb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DK843_18095
03430 Mismatch repair
DK843_18095
03440 Homologous recombination
DK843_18095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrb03032
]
DK843_18095
03400 DNA repair and recombination proteins [BR:
chrb03400
]
DK843_18095
Enzymes [BR:
chrb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DK843_18095
DNA replication proteins [BR:
chrb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DK843_18095
DNA repair and recombination proteins [BR:
chrb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DK843_18095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AXE37070
UniProt:
A0A344UP72
LinkDB
All DBs
Position
3757564..3758961
Genome browser
AA seq
465 aa
AA seq
DB search
MFAQPCAIVDLETTGGNIARDRITEVGMVLIDGERVERLSWLVNPGQPIPPFIENMTGIS
NEMAAAAPPFSALADDLLSRLQGRLLLAHNARFDYGFLKNEFRRQGLRFQARALCTVKLS
RRLYPQHFKHSLDSLIARHGIAMPERHRALADAEAVYRFIQIASAELGEDKVAHEASQLL
SQPAELSSLPADLQQQVEDMPDSAGVYALFGEDGRALYVGRAPNLYRKTLGHFAERKPGQ
KSHEARIDEPVARVEWRESLGDFGGHLLELQWLSRLQPLHNPRARMMGEVCTLQLQTGED
GFMRATPVSARDIDFTRTGDLYGLFRHAREARKALAQIALAQGLCQSVLGVEQVTSRKGQ
PCAAHQIRRCRGACVGEEEADSHNWRLKTALQRLKVKPWPFEGAVAVAEHDEVCGDVVEH
LFDRWCYLGSRRNGGALEGEPAFDLDYYKLLESELRKPDREVRAL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
ctgtttgcacaaccctgcgccatcgtcgacctggaaaccaccggcggcaacatcgcgcga
gaccgcatcacggaagtcggcatggtgctgatagatggcgagcgcgtcgagcgtctgtcc
tggttggtcaatccgggacaaccgattccccccttcattgagaatatgaccggcatcagc
aatgaaatggcagccgccgcgccgccgttttcggcgctggccgatgacttgctgtcccgg
ttgcaagggcggctcttgctggcgcacaacgcccgcttcgattacggtttcctgaaaaac
gaattccgccggcaggggctgcgtttccaggcgcgcgcgctatgcaccgtcaagctgtcg
cgccgcctgtacccgcagcatttcaagcacagcctggatagccttatcgcccgccatggc
attgcgatgccggaacgccaccgcgcgctggccgatgccgaggcggtgtatcgcttcatc
cagatcgcgagcgcggagctgggcgaagacaaggtggcgcatgaggcgtcgcagttgctg
tcgcagcctgccgaattgtccagtctcccggctgatctgcagcagcaggtggaggacatg
ccggactcggccggcgtctacgcgctgttcggcgaggacggcagagccttgtatgtgggg
cgggcgcccaatctctatcgcaagacgctgggccatttcgccgagcgcaagcctgggcag
aaaagccatgaggcgcggatagacgagccggtggcgcgtgtggaatggcgggaaagcctg
ggcgatttcggcggccatttgctggagctgcaatggttgagccggctgcagccgctgcac
aatccgcgcgcgcgcatgatgggcgaggtatgtaccttgcagttgcaaactggcgaggat
ggtttcatgcgggcgacaccggtatcggcgcgggacatcgacttcacccgcaccggcgac
ctttacggcctgttccgccatgcgcgcgaggcgcgcaaggcgctggcgcagatcgcgctg
gcgcagggcctgtgccagtcggtgctgggcgtcgagcaggtgaccagccgcaagggccag
ccttgcgccgcgcatcagatacgccgctgccggggcgcctgcgtgggcgaggaggaagcg
gacagccataattggcgtctgaagaccgcgttgcagcggctcaaagtcaagccgtggccg
ttcgagggcgcggtggcggtggcggagcatgacgaagtgtgcggcgacgtggtcgagcat
ctgttcgaccgctggtgctatctgggcagccgccgcaatggcggggcgctggaaggcgag
ccggcgttcgatctcgactattacaagttgctggaaagcgaactgcgcaagccggatcgg
gaggtgagggcgctttga
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