Chromobacterium phragmitis IIBBL 274-1: DK843_18345
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Entry
DK843_18345 CDS
T05744
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb00020
Citrate cycle (TCA cycle)
chrb00190
Oxidative phosphorylation
chrb00650
Butanoate metabolism
chrb00720
Other carbon fixation pathways
chrb01100
Metabolic pathways
chrb01110
Biosynthesis of secondary metabolites
chrb01120
Microbial metabolism in diverse environments
chrb01200
Carbon metabolism
Module
chrb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
chrb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
chrb_M00149
Succinate dehydrogenase, prokaryotes
chrb_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DK843_18345 (sdhA)
00650 Butanoate metabolism
DK843_18345 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
DK843_18345 (sdhA)
00720 Other carbon fixation pathways
DK843_18345 (sdhA)
Enzymes [BR:
chrb01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
DK843_18345 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Pyr_redox_2
GIDA
FAD_binding_3
Thi4
NAD_binding_7
Pyr_redox_3
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
AXE36084
UniProt:
A0A344ULD6
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All DBs
Position
3813121..3814896
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AA seq
591 aa
AA seq
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MGVAVRHFDAVVVGAGGAGMRAALQLSEAGLKTAVLSKVFPTRSHTVAAQGGVSASLGNS
EPDNWHWHMYDTVKGSDWLGDQDAIEFMCREAPKVVVELEHYGMPFDRNPDGTIYQRPFG
GHMSDFGEGKPVRRACAAADRTGHAMLHALYQRNVRANTHFFVEWMALDLIRDAEGRVQG
VVAMEMETSEIVVFQAKATLFATGGAGRIFASSTNAFINTGDGLGMAARAGIPLEDMEFW
QFHPTGVAGAGVLITEGVRGEGGILRNSSGERFMERYAPNAKDLASRDVVSRAMVSEINE
GRGCGPNKDHVLLDITHLDPEVIMSKLPGIREISIKFAGVDPIKAPIPVVPTCHYQMGGI
PTNYHGEVVIQGQPVHGFYAAGEVACASVHGANRLGTNSLLDLLVFGKSSANSIIEFVKQ
QPEDLPQLAMADVERSVARVARLDNQTNGVQVHDARAEMQRVMQAHCGVFRFKDMLAEGV
DKIMQVADMVAKTEIGDKSKVFNTARIEALELENLIEVAKATMVSANARTESRGAHVRDD
APDTPETPNGRDDVNWLKHTLWFRDGNRLEYKPVNMKPLTVDTIKLKARSY
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtagctgttcgtcattttgatgcggtggtcgtgggcgccggcggcgccggcatg
cgcgccgcgctgcaactgtcggaagccggtctgaagaccgccgtgctgtccaaggtgttc
ccgacccgttcccacaccgtggccgcccagggcggcgtgtccgcttcgctcggcaactcc
gagccggacaactggcactggcacatgtacgacaccgtcaaggggtcggactggctgggc
gaccaggacgcgattgaattcatgtgccgcgaagccccgaaagtggtggtggagctggag
cactacggcatgccgttcgaccgcaacccggacggcaccatctaccagcgcccgttcggc
ggccacatgtccgacttcggcgaaggcaagccggtccgccgcgcctgcgccgccgccgac
cgcaccggccatgccatgctgcacgcgctgtaccagcgcaatgtgcgcgccaacacccat
ttcttcgtggaatggatggcgctggacctgatccgcgacgccgaaggccgagtgcagggc
gttgtcgccatggaaatggaaacgtccgagatcgtcgtgttccaggccaaggccaccctg
ttcgccaccgggggcgccggtcgcatcttcgcctcgtccaccaacgctttcatcaatacc
ggcgacggcctgggcatggccgcccgcgccggcattccgctggaagacatggagttctgg
cagttccacccgaccggcgtggccggcgcgggcgtgctgatcaccgaaggcgtgcgcggc
gaaggcggcattctgcgcaacagctccggcgagcgcttcatggagcgctacgcgccgaac
gccaaggacctggcctcccgcgacgtggtgtcgcgcgcgatggtgtccgagatcaacgaa
ggccgcggctgcggcccgaacaaggaccacgtgctgctggacatcacccacctcgacccc
gaggtgatcatgtccaagctgccgggcatccgcgaaatctcgatcaagttcgccggcgtg
gacccgatcaaggccccgatcccggtggtgccgacctgccattaccagatgggcggcatc
cccaccaattaccacggcgaagtggtgatccagggccagccggtgcacggcttctacgcc
gccggcgaagtggcgtgcgcgtcggtgcacggcgccaaccgcctgggcaccaactcgctg
ctggacctgctggtcttcggcaagagctcggccaattccatcatcgagttcgtcaagcag
cagccggaagacctgccgcagctggcgatggccgatgtcgagcgctcggtcgcccgcgtc
gcccgcctggacaaccagactaacggcgtgcaggtgcatgacgcccgcgccgagatgcag
cgcgtgatgcaggcgcactgcggcgtgttccgcttcaaggacatgctggccgaaggcgtg
gacaagatcatgcaggtggccgacatggtggccaagaccgagatcggcgacaagtccaag
gtgttcaataccgcccgcatcgaagcgctggagctggagaacctgatcgaagtggccaag
gccaccatggtttccgccaatgcccgcaccgagagccgcggcgcccacgtgcgcgacgac
gcgccggacaccccggaaaccccgaacggccgcgacgacgtcaactggctcaagcacacc
ctgtggttccgcgacggcaaccgtctggaatacaagccggtgaacatgaagccgctgacc
gtggatacgatcaagttgaaggcccgctcctactaa
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