Chromobacterium phragmitis IIBBL 274-1: DK843_18380
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Entry
DK843_18380 CDS
T05744
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb00010
Glycolysis / Gluconeogenesis
chrb00020
Citrate cycle (TCA cycle)
chrb00260
Glycine, serine and threonine metabolism
chrb00280
Valine, leucine and isoleucine degradation
chrb00310
Lysine degradation
chrb00380
Tryptophan metabolism
chrb00620
Pyruvate metabolism
chrb00630
Glyoxylate and dicarboxylate metabolism
chrb00640
Propanoate metabolism
chrb00670
One carbon pool by folate
chrb00785
Lipoic acid metabolism
chrb01100
Metabolic pathways
chrb01110
Biosynthesis of secondary metabolites
chrb01120
Microbial metabolism in diverse environments
chrb01200
Carbon metabolism
chrb01210
2-Oxocarboxylic acid metabolism
chrb01240
Biosynthesis of cofactors
Module
chrb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
chrb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
chrb_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
chrb_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
DK843_18380 (lpdA)
00020 Citrate cycle (TCA cycle)
DK843_18380 (lpdA)
00620 Pyruvate metabolism
DK843_18380 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
DK843_18380 (lpdA)
00640 Propanoate metabolism
DK843_18380 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DK843_18380 (lpdA)
00280 Valine, leucine and isoleucine degradation
DK843_18380 (lpdA)
00310 Lysine degradation
DK843_18380 (lpdA)
00380 Tryptophan metabolism
DK843_18380 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DK843_18380 (lpdA)
00670 One carbon pool by folate
DK843_18380 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
chrb04147
]
DK843_18380 (lpdA)
Enzymes [BR:
chrb01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
DK843_18380 (lpdA)
Exosome [BR:
chrb04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
DK843_18380 (lpdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
AlaDh_PNT_C
HI0933_like
FAD_binding_2
Pyr_redox_3
NAD_binding_8
FAD_oxidored
GIDA
FAD_binding_3
3HCDH_N
DAO
2-Hacid_dh_C
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
AXE36091
UniProt:
A0A344ULE3
LinkDB
All DBs
Position
3821721..3823154
Genome browser
AA seq
477 aa
AA seq
DB search
MSQQFDVVVIGGGPGGYVAAIRAAQLGFSAACVDAFKNPEGKPSLGGTCLNVGCIPSKAL
LQSSENFHAVQHDFAKHGISVSGAKMDVGQMLSRKTDIINKNAAGIGFLFKKNKVANIHG
LAAFKGRQGDKWLIEVTDGGKVVDTLEAGHVIVATGSSPRALPGLATDNQLVLDNEGALA
LTAVPKRLGVIGAGVIGLEMGSVWKRLGAEVTILEAAPTFLAAADQQIAKEAFKTLTKDT
GLDIKLGVKIGEVKAGKKSVTVSYELNGEAVKAEFDKLIVSIGRVPNTQGLGAETVGLQL
DERGFVAVDDHCRTNLPNVWAIGDVVRGPMLAHKASEEGVAVAERIAGQKPHVDFGVIPW
VIYTSPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALGLGQAQGTVKILACAKTDRIL
GLHMIGPMVSELVSEGVVSMEFKAASEDLARIVHAHPSLSEVIHEAALAADKRALHG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacagtttgatgtggtagtgataggcggcggccccggcggctacgtcgcggcc
atccgcgcggcccagctgggcttcagcgcggcttgcgtcgacgcgttcaagaacccggaa
ggcaagccgtcgctgggcggcacctgcctgaacgtgggttgcattccgtccaaggcgctg
ctgcagtcgtcggaaaacttccacgcggtgcagcacgatttcgccaagcacggcatcagc
gtgtccggcgccaagatggacgtcggccagatgctgagccgcaagaccgacatcatcaac
aagaacgccgccggcatcggcttcctgttcaagaagaacaaggtcgccaacatccacggc
ctggccgccttcaagggccgccagggcgacaagtggctgatcgaagtcaccgacggcggc
aaggtggtggatactctggaagccggccacgtgatcgtggccaccggctccagcccgcgc
gcgctgccgggcctggccaccgacaaccagctggtgctggacaacgagggcgcgctggcg
ctgaccgctgtgccgaagcgcctgggcgtgatcggcgccggcgtgatcggcctggaaatg
ggctcggtgtggaagcgcctgggcgcggaagtgaccattctggaagccgcgccgaccttc
ctggccgccgccgaccagcagatcgccaaggaagcgttcaagacgctgaccaaggatacc
ggcctggacatcaagctgggcgtgaagatcggcgaagtgaaggccggcaagaagagcgtc
accgtcagctacgaactgaacggcgaagcggtgaaggccgaattcgacaagctgatcgtc
tccatcggccgcgtgccgaacacccagggcctgggcgccgagacggtcggactgcaactg
gatgagcgcggcttcgtcgccgtggacgaccactgccgcaccaatctgcccaatgtctgg
gcgatcggcgacgtggtgcgcggcccgatgctggcgcacaaggcgtcggaagagggcgtg
gcggtggccgagcgcatcgccggccagaagccgcacgtcgatttcggcgtgatcccgtgg
gtgatctacacttctccggagatcgcctgggtcggcaagaccgaagagcagctgaaggcc
gagggcgtcgagtacaagaagggcacgtcgggcttcggcgccaacggccgcgcgctgggc
ctgggccaggcgcaaggcacggtgaagatcctggcctgcgccaagaccgaccgcatcctg
ggcctgcacatgatcggcccgatggtgtccgagctggtcagcgaaggcgtggtgtcgatg
gaattcaaggccgccagcgaagacctggcgcgcattgtccacgcccacccgtcgctgtcg
gaagtgatccacgaagccgccctcgccgccgacaagcgcgcgttgcatggctaa
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