KEGG   Chromobacterium phragmitis IIBBL 274-1: DK843_18380
Entry
DK843_18380       CDS       T05744                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
chrb  Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb00010  Glycolysis / Gluconeogenesis
chrb00020  Citrate cycle (TCA cycle)
chrb00260  Glycine, serine and threonine metabolism
chrb00280  Valine, leucine and isoleucine degradation
chrb00310  Lysine degradation
chrb00380  Tryptophan metabolism
chrb00620  Pyruvate metabolism
chrb00630  Glyoxylate and dicarboxylate metabolism
chrb00640  Propanoate metabolism
chrb00670  One carbon pool by folate
chrb00785  Lipoic acid metabolism
chrb01100  Metabolic pathways
chrb01110  Biosynthesis of secondary metabolites
chrb01120  Microbial metabolism in diverse environments
chrb01200  Carbon metabolism
chrb01210  2-Oxocarboxylic acid metabolism
chrb01240  Biosynthesis of cofactors
Module
chrb_M00009  Citrate cycle (TCA cycle, Krebs cycle)
chrb_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
chrb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
chrb_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:chrb00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DK843_18380 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DK843_18380 (lpdA)
   00620 Pyruvate metabolism
    DK843_18380 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DK843_18380 (lpdA)
   00640 Propanoate metabolism
    DK843_18380 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DK843_18380 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DK843_18380 (lpdA)
   00310 Lysine degradation
    DK843_18380 (lpdA)
   00380 Tryptophan metabolism
    DK843_18380 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DK843_18380 (lpdA)
   00670 One carbon pool by folate
    DK843_18380 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:chrb04147]
    DK843_18380 (lpdA)
Enzymes [BR:chrb01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DK843_18380 (lpdA)
Exosome [BR:chrb04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DK843_18380 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox AlaDh_PNT_C HI0933_like FAD_binding_2 Pyr_redox_3 NAD_binding_8 FAD_oxidored GIDA FAD_binding_3 3HCDH_N DAO 2-Hacid_dh_C XdhC_C
Other DBs
NCBI-ProteinID: AXE36091
UniProt: A0A344ULE3
LinkDB
Position
3821721..3823154
AA seq 477 aa
MSQQFDVVVIGGGPGGYVAAIRAAQLGFSAACVDAFKNPEGKPSLGGTCLNVGCIPSKAL
LQSSENFHAVQHDFAKHGISVSGAKMDVGQMLSRKTDIINKNAAGIGFLFKKNKVANIHG
LAAFKGRQGDKWLIEVTDGGKVVDTLEAGHVIVATGSSPRALPGLATDNQLVLDNEGALA
LTAVPKRLGVIGAGVIGLEMGSVWKRLGAEVTILEAAPTFLAAADQQIAKEAFKTLTKDT
GLDIKLGVKIGEVKAGKKSVTVSYELNGEAVKAEFDKLIVSIGRVPNTQGLGAETVGLQL
DERGFVAVDDHCRTNLPNVWAIGDVVRGPMLAHKASEEGVAVAERIAGQKPHVDFGVIPW
VIYTSPEIAWVGKTEEQLKAEGVEYKKGTSGFGANGRALGLGQAQGTVKILACAKTDRIL
GLHMIGPMVSELVSEGVVSMEFKAASEDLARIVHAHPSLSEVIHEAALAADKRALHG
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgagccaacagtttgatgtggtagtgataggcggcggccccggcggctacgtcgcggcc
atccgcgcggcccagctgggcttcagcgcggcttgcgtcgacgcgttcaagaacccggaa
ggcaagccgtcgctgggcggcacctgcctgaacgtgggttgcattccgtccaaggcgctg
ctgcagtcgtcggaaaacttccacgcggtgcagcacgatttcgccaagcacggcatcagc
gtgtccggcgccaagatggacgtcggccagatgctgagccgcaagaccgacatcatcaac
aagaacgccgccggcatcggcttcctgttcaagaagaacaaggtcgccaacatccacggc
ctggccgccttcaagggccgccagggcgacaagtggctgatcgaagtcaccgacggcggc
aaggtggtggatactctggaagccggccacgtgatcgtggccaccggctccagcccgcgc
gcgctgccgggcctggccaccgacaaccagctggtgctggacaacgagggcgcgctggcg
ctgaccgctgtgccgaagcgcctgggcgtgatcggcgccggcgtgatcggcctggaaatg
ggctcggtgtggaagcgcctgggcgcggaagtgaccattctggaagccgcgccgaccttc
ctggccgccgccgaccagcagatcgccaaggaagcgttcaagacgctgaccaaggatacc
ggcctggacatcaagctgggcgtgaagatcggcgaagtgaaggccggcaagaagagcgtc
accgtcagctacgaactgaacggcgaagcggtgaaggccgaattcgacaagctgatcgtc
tccatcggccgcgtgccgaacacccagggcctgggcgccgagacggtcggactgcaactg
gatgagcgcggcttcgtcgccgtggacgaccactgccgcaccaatctgcccaatgtctgg
gcgatcggcgacgtggtgcgcggcccgatgctggcgcacaaggcgtcggaagagggcgtg
gcggtggccgagcgcatcgccggccagaagccgcacgtcgatttcggcgtgatcccgtgg
gtgatctacacttctccggagatcgcctgggtcggcaagaccgaagagcagctgaaggcc
gagggcgtcgagtacaagaagggcacgtcgggcttcggcgccaacggccgcgcgctgggc
ctgggccaggcgcaaggcacggtgaagatcctggcctgcgccaagaccgaccgcatcctg
ggcctgcacatgatcggcccgatggtgtccgagctggtcagcgaaggcgtggtgtcgatg
gaattcaaggccgccagcgaagacctggcgcgcattgtccacgcccacccgtcgctgtcg
gaagtgatccacgaagccgccctcgccgccgacaagcgcgcgttgcatggctaa

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