Chromobacterium phragmitis IIBBL 274-1: DK843_18615
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Entry
DK843_18615 CDS
T05744
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DK843_18615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrb03400
]
DK843_18615
Enzymes [BR:
chrb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DK843_18615
DNA repair and recombination proteins [BR:
chrb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DK843_18615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
HypA
Zn_ribbon_6
AAA_30
Paramyxo_ncap
Viral_helicase1
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AXE36132
UniProt:
A0A344ULI4
LinkDB
All DBs
Position
3868972..3871155
Genome browser
AA seq
727 aa
AA seq
DB search
MNGTVRVQVAVDVPLGGTFSYLTESPVMPGARVSVFFGNRRMCGVVVTPIPGEGVEEIDS
AKLRCIDSVLDGLPPLPEEFLALARFASDYYHHPLGQTLFTALPTGLREPRDVVRPDRRP
FALTAAGLGEPPPARQKARLALWQALQDGPLSLAEAKAATPQAGKLLADWLAEGKAERTT
PERPPLRLGRAPALNEEQGAALAALSASEGFQPWLLHGVTGSGKTEVYLRLIAEQLAGRR
QALVLVPEINLTPQLINRFADRFPDSRIVVQHSHLADGERMHGWLDAWHGDADVVIGTRL
SVFTPLPRLGLIVVDEEHDGSFKQQDGLRYHARDLAVWRARRAGIAILLGSATPSLETVA
NVEAGRYKKLALNRRAHGAARLPDVWLVDTRRKKLVEGLSEAVLDALKARLARKEMSLVF
INRRGFAPVVACTACGWTSGCPHCSAKLVVHLMERKLRCHHCGWEEPVPRACPDCGDPDI
KPLGEGTQRLESALQRMLPEARVLRIDRDTTSRKDAWDEVYRKVHGGEVDILVGTQMLAK
GHDFGTLSLVAALGADGGLYSADFRASERLFAQLMQVAGRAGRADAPGEVLVQTQWPDHP
LYQALAAHDFDGYAATLLNERRQAGFPPSTFQALLRADSPALAQATAFLRQAREALEPLA
EGVLISGPAPALMARLAQRERAQLVLESPQRGALHRLLHQLPPLLDGLAKAHGRALRWSL
DVDPQEL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggacggtacgggttcaggtggcggtggacgtccccttggggggtacgttcagc
tacctgactgaatcgcccgtcatgccgggggcgcgagtgagcgtttttttcggcaatcgc
cgcatgtgtggcgtcgtggtcacgccgatacccggggagggtgtggaggagatcgattcc
gccaagttgcggtgcatagacagcgtgttggatgggctgccgccgctgccggaagaattc
ctggcgttggcgcgctttgcgtccgactactaccaccacccgctgggccagacgctgttc
accgccttgcccaccggcctgcgcgagccgcgcgacgtggtccgtcccgaccgccgcccc
ttcgcgctgaccgccgccggcctgggcgagccgccgccggcgcggcagaaagcacgtctc
gcgctgtggcaagcactgcaagatggcccgctgagcctggccgaggccaaggcggcgacg
ccgcaggccggcaagctgttggccgattggctggccgaaggcaaggccgagcgtacgacg
ccggagcgcccgccgctgcggctggggcgcgcgccggcgctgaacgaagagcagggcgcg
gcgctggccgcgctttcggcgagcgaaggcttccagccctggctgctgcacggcgtcacc
ggcagcggcaagaccgaggtctatctgcgcctgatcgccgagcagctggcggggcggcgg
caggcgctggtgctggtgccggaaatcaatctgacgccgcaactgatcaatcgcttcgcc
gaccgttttcccgacagccgcatcgtggtccagcacagccacctggccgacggcgagcgc
atgcatggctggctggacgcctggcacggcgacgccgacgtggtgatcggcacccgcttg
tcggtgttcacgcccttgccgcggctggggctgatcgtggtggacgaggagcacgacggc
tcgttcaagcagcaggacggcctgcgctaccatgcccgcgacctggcggtatggcgcgcg
cgccgcgccggcatcgccatcctgctgggatcggccacgcccagccttgaaacggtggcc
aatgtcgaggccggccgctacaagaagctggcgttgaaccggcgcgcccacggcgcggcc
aggctgcccgacgtgtggctggtggacacccgccgcaagaagctggtcgagggcctgtcc
gaagcggtgctggacgcgttgaaggccaggctcgcgcgcaaggagatgagcctggtgttc
atcaaccgccgcggcttcgcgccggtggtcgcctgcaccgcctgcggctggaccagcggc
tgcccgcattgctcggccaagctggtggtgcacctgatggagcgcaagctgcgctgccac
cactgcggctgggaggagccggtgccgcgcgcctgtccggattgcggcgatccggacatc
aagccgctgggcgagggcacgcagcggctggagtcggcgctgcagcgcatgctgccggag
gcgagggtgctgcggatagaccgcgacaccaccagccgcaaggacgcctgggacgaggtt
taccgcaaggtgcacggcggcgaggtggacatcctggtcggcacccagatgctggccaag
gggcacgacttcggcaccttgtcgcttgtggcggcgctgggcgcggacggcgggctgtac
tcggcggatttccgcgcgtcggagcgcctgttcgcccaactgatgcaggtggccggccgc
gccggccgcgccgacgcgccgggcgaggtgctggtgcagacgcaatggccggaccatccg
ctgtaccaggcgctggcggcgcatgatttcgacggctacgcggccacattgctgaacgag
cgccggcaggccggctttccgccatccaccttccaggcgctgctgcgcgccgacagcccg
gcgctggcccaggccaccgcctttctgcgccaggcgcgcgaggcgctggagccattggcc
gagggcgtgctgatttccgggccggcgccggcgctgatggccaggctggcgcagcgcgag
cgcgcgcagctggtgctggaatcgccgcagcgcggcgcgctgcaccggctgcttcatcag
ttgccgccgctgctggatggcctggccaaggcgcacggccgcgcgctgcgctggtcgctg
gacgtggacccgcaggaattatga
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