Chromobacterium phragmitis IIBBL 274-1: DK843_19535
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Entry
DK843_19535 CDS
T05744
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb00260
Glycine, serine and threonine metabolism
chrb00460
Cyanoamino acid metabolism
chrb00630
Glyoxylate and dicarboxylate metabolism
chrb00670
One carbon pool by folate
chrb00680
Methane metabolism
chrb01100
Metabolic pathways
chrb01110
Biosynthesis of secondary metabolites
chrb01120
Microbial metabolism in diverse environments
chrb01200
Carbon metabolism
chrb01230
Biosynthesis of amino acids
chrb01240
Biosynthesis of cofactors
chrb04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DK843_19535 (glyA)
09102 Energy metabolism
00680 Methane metabolism
DK843_19535 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DK843_19535 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DK843_19535 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DK843_19535 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DK843_19535 (glyA)
Enzymes [BR:
chrb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DK843_19535 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AXE36294
UniProt:
A0A344ULZ6
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All DBs
Position
4062983..4064230
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AA seq
415 aa
AA seq
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MFAADQTIAKFDPELAAAIAAECQRQEDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRFYGGCEHVDVVEQLAIDRVKQLFGAEYANVQPHSGSQANQAVYFSILKPGDTVMGMN
LGHGGHLTHGSPANLSGKMFNIVAYGLNDKEEIDYDDMERVAMETKPKLIIGGASAYALR
FDFERMGQIAKKVGAYFMVDMAHYAGLVAAGLYPNPVPHADFVTSTTHKTLRGPRGGIIL
AKAEFEKSINSNVFPTLQGGPLEHVIAAKAVAFKEALQPEFKAYQEQVIKNAAIMAKTLA
ERGLRIVSGRTESHVFLVDLRAKGLTGKQADALLGRAHITVNKNAIPNDPETPFVTSGIR
IGSPAITTRGFKEAEAIEVANLVADVLDNPNDDALIARVAEKATALCHRFPVYAK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgttcgctgctgaccagacgatcgccaaattcgaccccgaactcgccgccgccattgcc
gcggaatgccaacgccaggaagatcacatcgagctgatcgcctcggaaaactacaccagc
ccggccgtcatggaagcccaaggctcccagctgaccaacaagtatgccgaaggctacccg
ggcaagcgcttctacggcggttgcgagcacgtcgacgtcgtcgagcaactggccatcgac
cgcgtcaagcagctgttcggcgccgaatacgccaacgtccagccgcactccggctcccag
gccaaccaggcggtgtacttctccatcctgaagccgggcgacaccgtgatgggcatgaat
ctgggccacggcggccacctgacccacggctctccggccaatctgtccggcaagatgttc
aacatcgtcgcctacggcctgaacgacaaggaagaaatcgactacgacgacatggagcgc
gtggcgatggaaaccaagccgaagctgatcatcggcggcgcgtccgcctacgccttgcgc
ttcgacttcgagcgcatgggccagatcgccaagaaggtcggcgcttacttcatggtcgac
atggctcactatgccggcctggtggccgcgggcctgtacccgaacccggtgccgcacgcc
gacttcgtgacctccaccacccacaagaccctgcgcggcccgcgcggcggcatcatcctg
gccaaggcggagttcgagaagagcatcaacagcaatgtgttcccgacgctgcaaggcggc
ccgctggagcacgtgatcgccgccaaggccgtcgccttcaaggaagcgctgcagccggaa
ttcaaggcgtatcaggaacaagtgatcaagaacgccgccatcatggccaagaccctggcc
gagcgcggcctgcgcatcgtgtccggccgcaccgagagccacgtgttcctggtcgacctg
cgcgccaagggcctgaccggcaagcaagccgacgcgttgctgggccgcgcccacatcacc
gtcaacaagaacgcgattccgaacgatccggaaaccccgttcgtcacctccggcatccgc
atcggctccccggccatcaccacccgcggcttcaaggaagccgaggccatcgaagtggcc
aatctggtcgccgacgtgctggacaacccgaacgacgacgcgttgatcgcccgcgtcgcc
gagaaggccaccgcgctgtgccatcgcttcccggtgtacgccaagtaa
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