Chromobacterium phragmitis IIBBL 274-1: DK843_20295
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Entry
DK843_20295 CDS
T05744
Name
(GenBank) sugar-binding protein
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
WHH
Colicin-DNase
Motif
Other DBs
NCBI-ProteinID:
AXE36427
UniProt:
A0A344UMC9
LinkDB
All DBs
Position
complement(4221751..4226286)
Genome browser
AA seq
1511 aa
AA seq
DB search
MTAPVAVLDGTPANASKAMAQTGQSFDQWLQGISDGYLSVDTLKTIGGAIPVVGNLISVG
DVVVDIMDMSEKARNKQEVDIFDWMFLGVDLIGVVPAAGSLFKVSTRPTLKICANAMRRA
GKDVAEYVIAPTLIEQLINMLPGNFRGEPWKWVDYVEGKIDRCLDQCIHDGGKYLLDLSD
LLRNAGSGTLGQYAAKNIPAKPVTYDLEKTNGTFWATIAAHMDAIGKAAENQKKNVAAGM
VITAAEAVDRMTAKSPALRTTLREMAGTLAFWALELSKKLLKMLKEKLKPLLAKLKDVFS
KYIKSKGGAVKNSLSKVAQNTKQIYKEVLSVFKGGGLGPKCGCPVPKPASRRSIDYLNGV
ETLSHTDFDLPGVMPIVWQRVYRSDFDANDNNGPLGARWMAPFASRFEENGEELAYYDNA
GRKLNYPLLPMGESLKDELEGYTLTRLDDKLISLSFGHELVQLYEKHGSHYQLALIKDRA
GNTLAINFLNDRISQLVSSAGYVVALSYDAAGRIVRIDQQDPETGLATRKLAEYRYTDIP
QLGGDAGDLLSATDENGQSWSYQYQHHLITRYTDRTGRGTTLEWDGNHAKARAIREYADD
GSLDIRLAWDERIDLTYITDAYGHTTEYYFDEKGYHYRTIFPDRNEEWLNYDANKRLIIH
IHPDASKDNYSYDDKGNLVLHERADGSEVHFTYDEQDNLVEIIDPIGEKWLRAYDDKGQL
VEETDPLGHKTKYAYNEQGLPVVITDAKGGAKKIAYRPDGLLESYTDCSGSATQWQYDER
GRPLLIVDAMGNATRYQYAANGTLQAIVQPDGQATQLEHDAEARLLKITDPLGRGTHYEY
DKAGRLQKRTDANGHSLGYQYDKLGRLAALRNENHRYYRFDYDDGGRLTAETGFDGSATR
YVYDNAGRLAQQVEGDVATDFRYDRAGRLIERSAPNSKESFGYDPAGRLFKAKNRYASLR
WVYDAVGNVSEEHHGYHVAGVKETYRWQHEYDKLGNRIATVRPDGHRVNVLNYGSGHVHG
LLFGQRDIFNLERDKLHRETQRVLGNALQQTLAYDKAGRLSSQRLMGATQWSRQYQYDAA
GQLTGIADNRSGQLSYRYDPVGRLLEAATPKGVESFRFDPAGNLLDNAPAADGHQDDSLL
GNLLSQYAGRHYRYDSRGNLLEKRVNGSLTRLEWDSHNRLSRLTAPDGQSTDYHYDPLGR
RIAKISQGQATLYGWDGDVLAFETRDEAAVHYLFEPDSFVPLAQVHTDAIRGVKVPAWSQ
HNPYDPDKDPLRQAGPEPQEPKAVYYYHTDHLGTPQALTDEQGALALEMDYQAWGQAREV
IADAANKAGIRNPFRFQGQYHDDESGLHYNRHRYYDPEIGRFISRDPIGLVGGINIHNYA
RNPIEWIDPLGLSGKPKNSPAVDKWTSKGGSICECPCGDWEYTDWEGNSVKYKNGYPDFT
PYQRQQVQIDMKGNHSSDFTQADKNAPLGPKLAQNTWHHHQDMTTMQEVPKKIHSRFTHC
GGVSLKKREKK
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgactgcacctgtagccgtacttgacggtacccctgccaacgcctccaaggccatggcc
caaactggacaatcattcgaccaatggctgcagggcataagtgacggctatttgagtgta
gataccctcaaaacgattggtggagcgattcccgttgtcggcaatctcatttctgtaggc
gatgtggtggtcgacatcatggatatgagtgaaaaggcccggaataaacaagaagtcgat
atttttgactggatgttcctaggggtggatttgattggcgtcgttcctgctgcaggcagc
ctgttcaaagtcagcactcgccccactctgaaaatctgtgcaaacgccatgcgtcgggct
ggcaaggatgttgcggaatacgttattgcccctacattgattgaacaactaatcaatatg
cttcccggaaattttcgcggagagccttggaagtgggtggactatgtagaaggaaagatt
gatcgctgcctggaccaatgcattcatgatggtggcaaatatctgctcgatctgtctgac
ttattgcgcaatgccggcagtggaactttaggccagtatgcggccaaaaatattcctgca
aaacctgtcacctacgacctagaaaaaaccaatggcaccttttgggcaaccatcgccgca
catatggatgccatcggaaaagctgccgaaaatcaaaagaaaaatgttgccgccggcatg
gtcattaccgcagcggaagcagttgatcgcatgactgccaagtctcccgctctgcgtact
acgctacgagaaatggctggcacgctagcgttctgggctcttgagctatctaaaaaactg
ctgaaaatgctaaaagaaaagcttaagcccttgctggcgaagctgaaagatgtcttctca
aaatacatcaagtccaaaggcggcgcggttaagaatagtttgagcaaagttgctcaaaat
acgaaacagatttacaaagaggttcttagcgtattcaaaggcggaggacttggcccaaaa
tgtggctgcccagtgcccaaaccggcatctcgtcgctcaattgattatttgaacggggtg
gaaaccctgagtcatacagattttgatttgcctggcgtgatgcccattgtctggcaacgc
gtatatcgctccgacttcgatgccaacgataataatggtccgctcggcgcgcgctggatg
gcaccattcgcttcccgttttgaagaaaatggggaagagttggcctactacgacaatgct
ggacgcaaactgaattatccactattgccgatgggagagtctctgaaagatgagttagaa
ggctacaccctgactcgtctagatgataagctgatttctctcagcttcggccatgagctg
gttcagctttatgaaaaacatggttcgcattaccaattagcactaatcaaagaccgcgct
ggcaacacgctggccatcaactttctcaatgaccgcatcagccaattggtcagcagcgcc
ggctatgtggtggcgttgtcatatgacgccgctggacgcattgttcgcatcgaccaacaa
gacccggaaaccggtttagcaacacgtaagcttgctgaatatcgctataccgacatcccg
caactaggaggcgatgccggagacttgctgtccgccactgacgaaaacggccagagttgg
agttaccaataccaacaccatctgatcacccgttataccgatcgtaccggccgcggcacc
acgctggagtgggatggcaaccatgccaaggcgcgtgcgatacgcgaatacgccgacgat
ggcagcctggacattcgcctggcgtgggacgaacgcatcgacctcacctacatcaccgat
gcctacggccacactaccgagtattacttcgacgaaaaaggctaccactaccgcacgatc
ttcccggatagaaacgaggaatggctgaattacgacgccaataagcgcctgatcatccat
atccacccggatgccagcaaagacaactacagctacgacgacaagggcaatcttgtcctg
cacgagcgcgccgacggtagcgaagtacactttacctacgacgaacaggacaatctggtc
gaaatcattgacccgataggcgagaagtggctgcgcgcctacgacgacaagggccaattg
gtcgaagaaaccgaccccctcggccacaaaaccaagtacgcgtacaacgagcaaggcctg
ccggtggtcatcaccgacgccaagggcggcgccaagaagatcgcctatcgtccggacggc
ctgctggaaagctataccgactgttccggcagcgccacccagtggcagtacgacgaacgc
ggccgaccgctgctgatcgtcgatgcgatgggcaacgccacccgctatcagtacgccgcc
aacggcacgctgcaagccatcgtccagccagacggccaggccacccagctggaacacgat
gccgaagcccgcctgctgaaaatcaccgatccgctgggccgcggcacccattacgaatac
gacaaggccggccggctgcaaaagcgcaccgacgccaacggccacagcctgggctaccag
tacgacaagctgggccgcctcgccgcgctgcgcaacgaaaaccaccgctactaccgcttc
gactacgacgacggcggccgcctgacggccgaaaccggcttcgacggcagcgccacccgc
tatgtctacgacaacgccggccgcctggcgcagcaggtggaaggcgacgtcgccacagac
ttccgctatgaccgcgccggccgcctgatcgagcgcagcgcgccgaacagcaaggaaagc
ttcggctacgacccggccggccgactgttcaaagccaagaaccgctacgccagcctgcgc
tgggtatacgacgccgtcggcaacgtttcagaagaacaccacggctaccacgtcgccggc
gtcaaggaaacctatcgctggcagcacgaatacgacaagctgggcaaccgcatcgccacc
gtccggccggacggccaccgcgtgaacgtgctcaactacggcagcggccacgtgcacggc
ctgctgttcggccagcgcgacatcttcaacctggagcgcgacaagctgcaccgcgaaacc
cagcgcgtgctgggcaatgcgctgcagcagaccctggcctacgacaaggccggccgccta
tccagccagcggctgatgggcgccacccagtggagccgacagtaccagtacgacgccgcc
ggccaactgaccggcatcgccgacaatcgcagcggccagctgagttaccgctatgatccg
gtcggccgcctgctggaagccgccactcccaagggcgtggaaagcttccgcttcgacccc
gccggcaacctgctggataacgccccggccgccgacggccatcaggacgacagcctgctc
ggcaacctgctcagccagtacgccggccgccactaccgctacgacagccgcggcaatctg
ctagagaagcgcgtcaacggcagcctcacccggctggaatgggacagccacaaccgcctg
tcccgcctcaccgcgccggacggccagagcaccgactaccattacgacccgctggggcgc
cgcatcgccaagatcagccagggccaggccacgctgtacggctgggacggcgacgtgctg
gccttcgaaacccgcgacgaggcagcggtgcactacctgttcgagccggacagcttcgtg
ccgctggcccaggtgcacaccgacgccatccgcggcgtcaaggtaccggcctggagccag
cacaatccctacgacccggacaaggacccgctgcgtcaggccggacctgagccgcaagaa
ccgaaggcggtgtactactaccacaccgaccacctgggcaccccgcaagcgctgaccgac
gaacaaggcgcgctggcgctggaaatggactaccaggcctggggccaggcgcgcgaagtc
atcgccgacgccgccaataaagccggcatccgcaaccccttccgcttccaagggcagtat
catgacgacgaatccgggctgcactacaaccgccatcgctactatgatccggagatcggg
cggtttatttcgcgggatccgattgggttggtgggtgggattaatattcacaactatgca
agaaacccaatagaatggattgatccattggggctatcaggaaagcctaaaaactctcca
gcagtagataagtggacttccaaaggcgggagtatttgcgagtgtccatgtggcgattgg
gaatataccgattgggaaggaaactccgttaaatataaaaatggatacccagactttacg
ccatatcaacggcagcaagtacaaattgacatgaagggaaatcattcatcagactttact
caagcagataaaaatgctcctctaggtcccaaacttgcacaaaatacttggcaccatcat
caagacatgacgacaatgcaggaagtacctaaaaagatacattccaggtttactcattgc
ggtggcgtctctctcaaaaaaagggaaaaaaaatga
DBGET
integrated database retrieval system
