Chromobacterium phragmitis IIBBL 274-1: DK843_20430
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Entry
DK843_20430 CDS
T05744
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb00300
Lysine biosynthesis
chrb01100
Metabolic pathways
chrb01120
Microbial metabolism in diverse environments
chrb01230
Biosynthesis of amino acids
Module
chrb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DK843_20430
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
chrb01002
]
DK843_20430
Enzymes [BR:
chrb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
DK843_20430
Peptidases and inhibitors [BR:
chrb01002
]
Metallo peptidases
Family M20
DK843_20430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
YmgB
Motif
Other DBs
NCBI-ProteinID:
AXE36453
UniProt:
A0A344UMF5
LinkDB
All DBs
Position
complement(4261219..4262352)
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AA seq
377 aa
AA seq
DB search
MSATLDLARELIRRDSVTPRDEGCQALMISRLEAMGFTVEKMRHGDVDNFWARRGGAGPV
FCFAGHTDVVPTGPLDKWDSPPFEPTVRNGLLYGRGAADMKASLAAFVTACERFVAEHPD
HQGSLALLITSDEEGVAVDGTVRVVDALEARGETIDYCVVGEPTSDQRLGDTVKNGRRGS
LSGRLIVHGIQGHIAYPQLAKNPIHLLAPALAELAATRWDEGNAFFPPTSWQVSNIQAGT
GATNIIPGHCELLFNFRFSPESSADSLKERVCQTLDKHGLSYELHWQLSGQPFITPPGAL
TEALSQAIAEVADAKAELSTTGGTSDGRFIKRIARELVEFGPVNATIHKLNECVEVADVE
PLADIYRRTLELLLAKA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgacgctggatctcgcccgcgaactgatccgccgcgattccgtcaccccgcgc
gacgagggctgccaggcgctgatgatctccaggctggaggccatgggcttcaccgtggaa
aagatgcgccacggcgacgtggacaacttctgggcgcgccgcggcggcgccggcccggtg
ttctgcttcgccggccacaccgacgtggtgcccaccggcccgctggacaaatgggacagc
ccgccgttcgagcccaccgtgcgcaacggcctgctctacggccgcggcgcggcggacatg
aaggcgtcgctggccgccttcgtcaccgcctgcgagcgcttcgtcgccgagcatccggat
caccagggctcgctggcgctgttgatcacctcggacgaggaaggcgtggcggtggacggc
acggtgagagtggtggacgcgctggaagcgcgcggcgaaacgatagactactgcgtcgtc
ggcgaaccgacgtcggaccagcgcctgggcgacaccgtcaagaacggccgccgcggctcg
ctgtccggccgtctgatcgtgcatggcatccagggccacatcgcttacccgcaactggcg
aaaaaccccatccacctgctggcgcccgccttggcggaactggccgccacgcgctgggac
gagggcaacgccttcttcccgcccaccagctggcaggtgtccaacatccaggccggcacc
ggcgccaccaacatcattcccggccactgcgagctgttgttcaacttccgcttctcgccg
gaaagcagcgccgacagcctgaaggaacgcgtttgccagacgctggacaagcacggcctg
tcctacgagctgcactggcagctgtccggccagcccttcatcacgccgccgggcgcgctg
accgaggcgctgagccaggccatcgccgaggtggccgacgccaaggccgagctgtccacc
accggcggcacctcggatggccgcttcatcaagcgcatcgcgcgggagctggtggagttc
ggcccggtcaacgccaccatccacaaactgaacgagtgcgtggaagtggccgatgtggag
ccgctggccgacatctaccgccgcacgctggagttgcttttggccaaggcgtga
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