Chromobacterium phragmitis IIBBL 274-1: DK843_20445
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Entry
DK843_20445 CDS
T05744
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb00061
Fatty acid biosynthesis
chrb00071
Fatty acid degradation
chrb01100
Metabolic pathways
chrb01212
Fatty acid metabolism
chrb02024
Quorum sensing
chrb04146
Peroxisome
Module
chrb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DK843_20445
00071 Fatty acid degradation
DK843_20445
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DK843_20445
09145 Cellular community - prokaryotes
02024 Quorum sensing
DK843_20445
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
chrb01004
]
DK843_20445
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
chrb04147
]
DK843_20445
Enzymes [BR:
chrb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DK843_20445
Lipid biosynthesis proteins [BR:
chrb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DK843_20445
Exosome [BR:
chrb04147
]
Exosomal proteins
Exosomal proteins of breast milk
DK843_20445
Exosomal proteins of breast cancer cells
DK843_20445
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AXE36456
UniProt:
A0A344UMF8
LinkDB
All DBs
Position
complement(4263954..4265633)
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AA seq
559 aa
AA seq
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MDKVWLKNYQPGVAHEIDINQFQSVTEVFDRSVKKFSSRPAMACMDKVLSYAELDALSGR
FASFLQHRLGVKKGDRVAIMMPNLLQYPIAVFGTLRAGGVVVNVNPLYTPRELEHQLKDS
GAETIVILENFAGVLEQVLPRTQVKNVVVASIGELLGFLKGALVNFVVRKVKKMVPPWHI
PGHVRFGDALSIGAAKPYDKVALGHEDIAFLQYTGGTTGVAKGAVLLHKNIVANMLQASA
WVNTLVREGQEVIVTALPLYHIFSLTANLMVFTELGALNVLITNPRDISGFVKELRKYPI
TCITGVNTLFNALLNHPEFAKLNFSTWRLTLGGGMAVQKAVADKWKSVTGVTLAEAYGLT
ETSPAACINPMDLKEYNGTIGLPVPSTEIEIRDAEGKPVAQGEQGELCIRGPQVMRGYWN
RPDETDKVLGADGFLATGDMAMLTPEGFVKLVDRKKDMILVSGFNVYPNEIEDVVAGHPD
VLEVACIGVPDDKSGEVVKVFVVKKNPALTDKDIIRYCRENLTGYKVPKLVEFRSELPKT
NVGKILRRALRDQETAKQA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggataaggtgtggctcaaaaactaccagcccggcgtcgcccacgagatcgacatcaac
cagttccagtcggtaaccgaggtgttcgaccgcagcgtcaagaaattcagctcccggcca
gcgatggcctgcatggacaaggtgctcagctatgccgagctggacgcgctcagcggccgc
ttcgcctccttcctgcagcataggctgggcgtgaagaaaggcgaccgcgtcgccatcatg
atgcccaatctgctgcaatacccgatcgccgtgttcggcacgctgcgcgccggcggcgtg
gtggtcaacgtcaacccgctgtacaccccgcgcgaactggagcatcagttgaaggactcc
ggcgccgaaaccatcgtcatcctggagaacttcgccggcgtgctggaacaagtgctgccg
cgcacccaggtgaagaacgtggtggtcgcctccatcggcgagctgcttggtttcctcaag
ggcgcgctggtgaacttcgtggtgcgcaaggtcaagaaaatggtgccgccatggcacatc
cccggccatgtccgcttcggcgacgcgctgtccatcggcgcggccaagccctacgacaag
gtggcgctgggccatgaagacatcgctttcctgcaatacaccggcggcaccaccggcgtg
gccaagggcgctgtgctgctgcacaagaacatcgtcgccaacatgctgcaggctagcgcc
tgggtgaacaccttggtgcgcgagggccaggaggtgatcgtcaccgccctgccgctgtac
catatcttctcgctgaccgcgaacctgatggtgttcaccgagctgggcgcgctgaacgtg
ctgatcaccaacccgcgcgacatctccggcttcgtcaaggagctgcggaagtatcccatc
acctgcatcaccggcgtcaacaccctgttcaacgcgctgctgaaccacccggagttcgcc
aagctgaacttctccacctggcgcctgacgctgggcggcggcatggcggtgcaaaaggcg
gtggccgacaaatggaagtccgtcaccggcgtgacgctggccgaagcctacggcctgacc
gaaaccagcccggccgcctgcatcaacccgatggatctaaaggaatacaacggcaccatc
ggcctgccggtcccctccaccgagatcgaaatccgcgacgccgaaggcaagccggtcgcc
cagggcgaacagggcgagctgtgcatccgcggcccgcaagtgatgcgcggctactggaac
cgtccggacgaaaccgacaaggtgctgggcgccgacggcttcctcgccaccggcgacatg
gccatgttgactccggaaggcttcgtcaagctggtggaccgcaagaaggacatgatcctg
gtctccggcttcaacgtctatcccaacgagatcgaagacgtggtggccggccaccccgac
gtgctggaagtggcttgcatcggcgtgcctgacgacaagtccggcgaggtggtcaaggtg
ttcgtggtgaagaaaaacccggcgctcaccgacaaggacatcatccgctactgccgcgaa
aacctcaccggctacaaggtgcccaagctggtggaattccgcagcgagctgcccaagacc
aatgtcggcaagatcctgcgccgcgcgctgcgcgaccaggaaaccgccaagcaggcctga
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