Chryseobacterium gotjawalense: QGN23_02940
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Entry
QGN23_02940 CDS
T09471
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
chrc
Chryseobacterium gotjawalense
Brite
KEGG Orthology (KO) [BR:
chrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrc03400
]
QGN23_02940 (sbcD)
DNA repair and recombination proteins [BR:
chrc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QGN23_02940 (sbcD)
Archaeal homologous recombinant proteins
QGN23_02940 (sbcD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WHF52241
LinkDB
All DBs
Position
complement(661626..662831)
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AA seq
401 aa
AA seq
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MKILHTADWHLGKRLDRFSRLEEQVLVLNEIIAIADEQNVDLVLVAGDLFDTFNPSVDAI
ELFYKTLKRLSLKGKRPVIAISGNHDAPNLIDAPNPLARECGIILIGHPNAEVHPFELEN
FKITNSAQGFLELKLNGFDFPIRILHTPYANEIRLKEYFGENKEQALNLVLAANWARIAD
EFCDENGVNLLMAHLYMNKKGTEILEEPDGEKPIKIGNADLIFSETIPPQIQYTALGHLH
GFQNIGTPEKPVVYSSSPLCYSFSEAGQTKYISIIEAEPNKAVSFEKIPLKNGKPLFRKT
FDSVEKTIDWLTENPNSLVELTLESETFLKAEERKQIYQSHGGIVHLIPKVKSQEFTENN
LHEINLDQDIQSLFQDYFKSKNNGQQANEDLLNLLNEILNP
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctgcataccgccgattggcatttgggtaaacggttagaccgtttttcgcgt
ctggaagaacaggttttagttttgaatgaaataatagcaattgccgatgaacagaacgta
gatttagttcttgtcgctggagacttgtttgatacttttaatcctagtgtcgacgcgatt
gaattgttttataaaacgctgaaacgtttatcattaaagggaaaacggccggttattgca
atttccggaaatcacgatgctcccaatttgatcgatgctcccaatcctttggcacgcgaa
tgcggtatcattctcatcggacatcccaatgctgaagttcatccttttgaactcgaaaat
tttaaaataacgaattctgcccaaggttttttagaattaaaattgaacggttttgatttc
ccaatccggattttgcatacgccttacgctaatgaaatccggttaaaagaatattttggc
gaaaataaagaacaggcgcttaatctggttttagcagcaaactgggcaaggattgccgat
gaattctgcgatgaaaatggagtgaatcttttgatggctcatttgtatatgaataaaaaa
ggaactgagattctggaagaacccgatggagagaaacctattaaaatcggaaacgcagat
ttgattttttcagaaaccattccgccgcaaattcaatataccgctttgggacatttgcat
ggttttcaaaatatcggaactccggaaaaaccggtcgtttattcgtcgtcgcctttgtgc
tacagtttcagtgaagcgggtcagaccaaatatatttccattattgaagctgaaccgaac
aaagcggtttcatttgagaaaattcctttgaaaaacggaaaacctttgtttcggaaaact
ttcgattccgttgaaaaaacaattgattggctgactgagaatccaaattctctggtggaa
ttgactttagaaagtgaaacctttttgaaagccgaagagcgcaaacagatttatcagtcc
cacggcggaattgttcacttgattccgaaagttaaaagccaggaatttacagaaaataac
ttgcacgaaatcaatctcgatcaggatattcagtctttgtttcaggattattttaaatcc
aaaaacaatgggcaacaggctaatgaagaccttcttaatttgttaaatgaaattctaaat
ccttaa
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