Chryseobacterium gotjawalense: QGN23_03325
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Entry
QGN23_03325 CDS
T09471
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
chrc
Chryseobacterium gotjawalense
Pathway
chrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QGN23_03325 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chrc03019
]
QGN23_03325 (recQ)
03400 DNA repair and recombination proteins [BR:
chrc03400
]
QGN23_03325 (recQ)
Enzymes [BR:
chrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QGN23_03325 (recQ)
Messenger RNA biogenesis [BR:
chrc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QGN23_03325 (recQ)
DNA repair and recombination proteins [BR:
chrc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QGN23_03325 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
HTH_40
Motif
Other DBs
NCBI-ProteinID:
WHF52317
LinkDB
All DBs
Position
complement(748733..750937)
Genome browser
AA seq
734 aa
AA seq
DB search
MNTQTTELSKELKKYFGFSKFKGQQEEIIKTLMKGDDVFVLMPTGGGKSLCYQLPALISD
GTAIVVSPLIALMKNQVDAINGLSSVEGIAHVLNSSLNKTQTKQVFDDIKSGVTKLLYVA
PESLIKEEYQEFLRDVKISFVAIDEAHCISEWGHDFRPEYRNLKSIIDKIADVPVIALTA
TATPKVQDDIQKTLGMSNALVFKESFNRPNLFYEVRPKVNIDREIVKFINSHKGKSGIVY
CLSRRKVEEFAQVLQVNGINALPYHAGLDQKTRVMNQDKFLMEDCDIIVATIAFGMGIDK
PDVRFVIHYDIPKSLESYYQETGRAGRDGGEGHCLAFYDPKDIEKLEKFLAQKPVSEREI
GLQLLNEVVGYVETSMSRRQYILCYFGEQFDPINGDGALMCDNSVNPPTLKDASKELKLV
LNLVKELEEKFKTKDLISVIVGKENPVTKSYKLETNKRFGVGKKETENFWKSIIRQATVQ
NFLQKDIETYGVLKLTEKGNKTLSSKSDTEFFIAEDREYNLEQTKADSDKVQTQAGGSLD
QVLFGQLKDLRKSVAKKYGIPPYTVFMDPSLEDMTVQYPINIEEIGKVYGVGEGKAKKYG
KEFADFIKKYVEENGIERTQDMVMKTVANKSSHKVFIIQSTDKKIDLEDIAKAKNISMDE
LLKEMERIVYQGTKLNIDYYIDENFDEDVVEEFMEFMGDSESDSMKVLLAEFGDELSDEE
VRMLRIKFISDVAN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaatacacaaaccaccgaattatctaaggaattaaagaaatatttcggtttctcaaaa
tttaaaggtcaacaagaagaaattataaaaaccctgatgaagggagatgatgtttttgtt
ttaatgcctaccggcggaggaaaatcactctgctatcaactaccagcattgatttcggac
ggaactgcgattgttgtttcaccattaatagctttgatgaaaaatcaagtagatgcgatt
aacggactttcttctgtggaaggaatagcacacgtcctcaattcctcactcaataaaacc
cagaccaaacaggttttcgatgatatcaaatcgggcgttaccaaattattatatgttgct
ccggaatctttaattaaagaagaatatcaggaatttctgcgggatgttaaaatatcattt
gtcgcaattgatgaagctcactgtatttcagaatggggacatgatttccggccggaatat
agaaacctgaaaagcattattgataaaattgcagatgtgccggttattgctttaaccgcg
acggcaaccccgaaagtacaggatgatattcagaaaactttaggaatgagcaatgcgttg
gttttcaaagagagtttcaacagaccgaatcttttttatgaagtaagaccgaaagtgaat
atcgatcgggaaatcgtaaaattcattaattctcataaaggtaaatcgggcattgtttat
tgtttaagccgtagaaaagtagaagaatttgcacaggttcttcaagtcaacgggattaat
gcattgccgtatcatgcaggtctggatcagaaaaccagagtgatgaaccaggataaattt
ctgatggaagactgtgatattattgtagcaaccatcgcatttggaatgggaatagacaaa
ccggatgtgcgttttgtgattcattatgacatcccgaaatcgctcgaaagttattatcag
gaaaccggtcgggcaggacgtgatggaggagaaggacattgtcttgcattttatgatccg
aaagacatcgaaaaattagaaaaatttctggctcagaaaccggtttcagaacgcgaaatt
ggcttgcaacttttaaatgaagtagtgggttacgtagaaacttcaatgagcagaaggcaa
tatatcctctgttattttggtgaacagtttgatcccattaatggcgatggtgcattaatg
tgcgacaattctgtgaatcctccaacattaaaagatgcttcaaaagaattgaaactggtt
cttaatttagtaaaagaactggaagagaaattcaagacaaaagatcttatttccgttatt
gttggtaaagaaaatcctgtgaccaaatcttataaattagaaaccaataagcgttttggt
gtcggcaaaaaagaaacggaaaatttctggaaatcgattataaggcaagcgaccgtccaa
aacttcctgcaaaaagatatcgagacttacggtgttttaaaattaactgaaaaaggaaac
aaaacactttcttcaaaatcggataccgaattttttatcgctgaagatcgcgaatataat
ttggaacagaccaaggcagattccgataaagttcaaacccaagctggcggcagtctggat
caggttctttttggtcagttaaaagatctgcggaaatcggtggccaagaaatatggtatt
ccgccttacacggtttttatggatccgagtttagaagatatgacggtgcagtatcctatt
aatattgaggaaatcggaaaggtgtatggagttggtgaagggaaagctaaaaagtacgga
aaagaatttgcagactttataaaaaagtatgttgaagaaaacggaatagaaagaactcag
gatatggtcatgaaaacggtggccaataaatccagtcacaaagtttttattattcagagt
accgataaaaaaatcgatttggaagacatcgccaaagcgaaaaatatttcaatggatgaa
ctgttgaaagaaatggaacggatcgtttatcaaggcacaaaattaaatattgattattat
atcgatgaaaattttgatgaagatgtcgtagaggaatttatggaatttatgggtgacagc
gaaagcgacagtatgaaagtccttttggcggaatttggtgatgagttgagtgatgaagaa
gtgagaatgttacggattaaatttatttctgatgtagcgaactaa
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