Chryseobacterium gotjawalense: QGN23_03960
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Entry
QGN23_03960 CDS
T09471
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
chrc
Chryseobacterium gotjawalense
Brite
KEGG Orthology (KO) [BR:
chrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chrc03016
]
QGN23_03960 (truB)
Enzymes [BR:
chrc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QGN23_03960 (truB)
Transfer RNA biogenesis [BR:
chrc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QGN23_03960 (truB)
Prokaryotic type
QGN23_03960 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WHF52441
LinkDB
All DBs
Position
complement(884960..885664)
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AA seq
234 aa
AA seq
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MTDTDFLEGQIILLDKPLDWTSFQAVNKLKYKLKSEFNLPKKFKIGHAGTLDPRATGLLI
VCTGKFTKIIPEIQDAPKEYFTEIKIGVQTESYDTEKPEILPQDISNITEVQINETLNKF
LGEIDQKPPVFSAIKIEGNRAYDLARAGKEVEMKSRKTTINYIKDIVIELPFVRFTVGCS
KGTYIRSLAHDIGQDLGVGAYLTNLRRTKIGEYSIENGSSEYLENEYRFEDFNI
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgactgataccgatttcttagaaggacagataatactcctcgacaaacctctggattgg
acgagctttcaagccgtaaacaaactgaaatataaactcaaaagtgaatttaatcttccg
aagaaattcaagatcgggcacgccggaactttggatccgcgggcgacagggcttttaatc
gtttgcacgggaaaattcaccaaaataattccagaaattcaagatgctccgaaagaatat
ttcactgaaataaaaataggagttcagacagaatcttacgacaccgaaaaacctgaaatt
cttcctcaggatatttcaaatattacagaagttcagatcaacgaaactttaaataaattt
ctgggcgaaatcgatcagaaaccgcctgttttctccgccattaaaattgaaggaaaccgc
gcgtacgacttagccagagcaggaaaagaagtcgaaatgaaatcccgtaaaacgaccatt
aactatatcaaagatattgtgatcgaattgcctttcgttagatttaccgtcggttgttcg
aaaggaacttatatccggagtctggcgcacgatatcgggcaggatttaggagtgggagcg
tatctcaccaatcttcgccgaacaaagatcggtgaatattctatcgaaaatggaagttca
gaatatctggaaaatgaatatcgttttgaagactttaatatatag
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