Chryseobacterium gotjawalense: QGN23_04100
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Entry
QGN23_04100 CDS
T09471
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
chrc
Chryseobacterium gotjawalense
Pathway
chrc03030
DNA replication
chrc03430
Mismatch repair
chrc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QGN23_04100 (dnaE)
03430 Mismatch repair
QGN23_04100 (dnaE)
03440 Homologous recombination
QGN23_04100 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrc03032
]
QGN23_04100 (dnaE)
03400 DNA repair and recombination proteins [BR:
chrc03400
]
QGN23_04100 (dnaE)
Enzymes [BR:
chrc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QGN23_04100 (dnaE)
DNA replication proteins [BR:
chrc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QGN23_04100 (dnaE)
DNA repair and recombination proteins [BR:
chrc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QGN23_04100 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
FKBP26_IF
Motif
Other DBs
NCBI-ProteinID:
WHF52468
LinkDB
All DBs
Position
complement(914408..917473)
Genome browser
AA seq
1021 aa
AA seq
DB search
MFLNSHTFHSLRYGTLSVEELVKQAAGAGAKELVLTDINTVTAIYDFKKECEKFGIKPVV
GVEIRKENQLLYMTIAKDETGIAEINRLLTNHNCDGAELPQVSPDFQNVFVIYPLQNIPE
VLKENEFIGVRAEELNLLIRAEWKSFLDKMVILHPITFKTKKEFNLHRILRAIDQNTLIS
KLAENDFCSPNEVFEPVSTIIEKFKRYPEIIQNTQFILHHCEFNFDFKTPKNKIYFTENK
ETDAALLRKLAYEGLDERYPERTQIVIDRIEKELKVVTEMNFAGYFLITLDIVKYSMSRG
FLHVGRGSGANSIISYCLGITEICPIELNLYFERFLNQHRNNPPDFDIDWSWRERDEILK
YIFERYGKEHVAFCGTNVEFKYRSIFREVGKAFGLPKEELDVLAKNPMATHDDNKVVKLV
QKYGMLLEKFPNQRSMHSCGIIISQEPLTNYTALEMPPKGFPIVQFDMNVAEDIGFEKFD
ILSQRGLGTINDTLKLVHKNQGVTIDIHNTKFFKNDKNCNDYLSIGKTIGCFYIESPAMR
GLLRRLKCEDYPTLVAASSIIRPGVAKSGMMKEYIFRHNNPTQFEYFHDVFKEQLGETYG
IMVYQEDVIKIALHFGGVSADDGDVLRRAMSGKSRSIQKLQEVREHFFESCAQKGHPEQL
SKEVYRQIESFAGYSFCKAHSASYAVESYQSLYLKVYYPIEFMVSAINNGGGFYRTEVYV
HECRMSGGKIQNPCVNRSLVETTVYSEDVFLGFMHIEKLESKTAHFIPEERAKNGDYTSL
ENFIKRVPVGIETLQILIFVGAFRFTGKPKNELLIEARLLMIHFKPEYRLPAFFETPVQE
YQLPTLKRNPFEDAFDEIEILGFSVSCSPFDLLQTKFRGEVMAKDLPKYHKRQVRMLAYL
ISRKHVPTKRGTMFFGTWIDVEGNFFDTAHFPDNLQKYPFQGGGCYLLAGMVEVDFHFPT
ITVFKMAKMPFIPDPRYAEDQEKSYEVHKKINEDVSMTWRKPYPQESEIGLPRNKMVVEK
R
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcaattcccacacctttcacagccttcgttacggcactttatcggttgaagaa
ctggtgaagcaagccgccggtgccggtgcgaaagaactggttttgaccgatatcaatacc
gtcaccgcgatctatgattttaaaaaagagtgtgaaaaattcggcatcaaaccggtggtg
ggcgtagaaatcagaaaggaaaaccaacttctttatatgaccattgccaaagatgaaacc
ggaattgccgagatcaaccgtttattgacgaaccacaattgtgatggcgctgaacttccc
caggtttctcccgattttcagaacgtatttgttatttatcctttgcaaaatattccggaa
gtcttaaaggaaaacgaatttatcggcgttcgtgcagaagagctgaatcttttaatccgt
gcggaatggaaaagttttttagataaaatggtcattttacatccgatcacttttaaaacg
aaaaaagaatttaacctgcaccggattttacgggccattgatcagaatacattgatttca
aaattggcagaaaacgatttttgttcacccaatgaagtttttgagcctgtttcaactatt
atagaaaaattcaaaagatatccggagatcattcaaaatacgcaatttattttacatcac
tgcgaattcaattttgattttaaaacaccgaaaaacaagatttactttaccgaaaataaa
gaaaccgatgcagcacttttaagaaaacttgcctacgaaggtttggatgaaagatatccc
gaaagaacccagattgtgattgaccgcattgaaaaagaactgaaagtcgttaccgaaatg
aacttcgcgggctactttcttattactttggatattgtgaaatacagcatgagtagaggt
tttctgcatgttggaagaggcagtggtgcgaacagcatcatcagttattgcctcggaatt
acagaaatctgtcccatcgaactcaatctttattttgaacgttttttgaatcaacatcgg
aataatccgccggattttgatattgactggagttggcgggaacgggacgaaattctgaaa
tatattttcgagcgttatggaaaagagcacgtcgctttttgtgggaccaatgttgagttt
aaataccgctctatttttcgggaagtcgggaaagcttttggtttgcccaaagaggaactc
gatgttttggcgaaaaatcctatggccactcacgatgacaataaagtcgtaaaactcgtg
cagaaatacggaatgttgctcgaaaaattcccgaatcagcgcagcatgcattcctgcgga
attatcatttcccaggaaccgctcacgaattataccgccttggaaatgccgccgaaaggt
ttccccatcgtgcagttcgatatgaatgtggcggaagatatcggatttgaaaagtttgat
attctttctcagcggggattgggaaccattaacgatacgctgaaacttgtccataaaaat
cagggagttacgattgatattcacaacacgaagttttttaaaaatgataaaaactgcaat
gattatttaagcatcgggaaaaccatcggctgtttttatattgaaagtcctgccatgcgc
ggtttattgcggcgtttgaagtgtgaagattacccaactttggttgccgcttcgtcaatt
attcgtccgggtgtggcgaaaagcggcatgatgaaggaatatattttccggcataataat
ccgacgcagtttgagtatttccatgatgtttttaaagaacagttgggcgaaacctacgga
attatggtttatcaggaagatgtgattaaaattgcgctgcattttggcggcgtttctgca
gatgatggcgatgtgttgcggcgggcgatgagcggaaaaagccggtccattcaaaaattg
caggaagtacgcgaacatttttttgaatcgtgcgctcaaaaaggtcatccggaacagtta
tccaaagaagtttaccggcagatcgaatcctttgcgggctattctttttgcaaagcgcat
tcggcttcgtatgccgtagaaagttaccaaagtctttatttaaaggtgtattacccgatt
gaatttatggtttctgcgatcaataacggcggtggattttaccggactgaagtgtacgtt
cacgaatgccggatgtccggcggaaaaattcaaaatccgtgtgtgaaccggagtttggtg
gaaacaacagtttatagcgaagacgtttttttaggtttcatgcatatcgaaaaactcgaa
agtaaaaccgctcattttattccggaagaaagagcgaaaaacggtgattacacttctttg
gaaaatttcatcaaacgcgttccggtcgggattgaaacgttgcagattttgatttttgta
ggcgcttttcggtttacaggaaaaccaaaaaatgaactgttgatcgaagcgcgtttgctc
atgattcatttcaaacccgaataccggttgcccgctttttttgaaacgccggtgcaggaa
tatcaacttcccactttaaaaagaaacccttttgaagatgcttttgatgaaatagaaatt
ctgggtttttctgtttcctgcagtccgtttgatctgttgcagacgaaatttcggggcgag
gtgatggcgaaagatttaccaaaatatcacaaacggcaggtgagaatgctggcgtatctc
atttcccggaaacacgttcccacgaaaagaggcactatgtttttcggcacctggattgat
gtggaagggaattttttcgacaccgcgcatttccccgataatttgcagaaatatcctttt
cagggcggcggttgttatttgttggcaggaatggtagaagtggattttcatttcccgacc
attacggttttcaagatggcgaaaatgccttttattcccgacccacgttatgccgaagat
caggaaaaaagttatgaagttcacaaaaagatcaatgaagatgtgagcatgacctggaga
aaaccttatcctcaggaaagtgagatcggtttgccgcggaataaaatggtggtggagaaa
agataa
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