Chryseobacterium gotjawalense: QGN23_04500
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Entry
QGN23_04500 CDS
T09471
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
chrc
Chryseobacterium gotjawalense
Pathway
chrc03030
DNA replication
chrc03430
Mismatch repair
chrc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QGN23_04500 (holA)
03430 Mismatch repair
QGN23_04500 (holA)
03440 Homologous recombination
QGN23_04500 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrc03032
]
QGN23_04500 (holA)
03400 DNA repair and recombination proteins [BR:
chrc03400
]
QGN23_04500 (holA)
Enzymes [BR:
chrc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QGN23_04500 (holA)
DNA replication proteins [BR:
chrc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QGN23_04500 (holA)
DNA repair and recombination proteins [BR:
chrc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QGN23_04500 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
TOPRIM_C
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
WHF52542
LinkDB
All DBs
Position
complement(997649..998683)
Genome browser
AA seq
344 aa
AA seq
DB search
MKELDLILKNIKNKELLPIYFFHGEEPYFMDVALKSFENDVLTEDEKAFNQTVVYGKDTT
FAEVLSLARQFPMMGDRQVIIVKEAQDITLTEPESKALLAYAENPVESTVLIIAYKYKKA
DARKAFVKTLTQKKMLYLSEKVKDYNVPKWIENEIKTLRIQAKPNIPTLLAEYLGTDLSR
ISNELQKLKMILKEGEILDEKKIETNIGISKDFNVFELIKALGKKDEIGAFKIAHYMGKS
KTHSLVMTTGNLYNFFSNLIIFHTMKAESPQNQASVMGVNPYFLKDFAEAARFYNLKNCT
RAVSILREIDLKSKGLGAINMTDGELLKEMVYKILHIDQYKVQT
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattagatttaatcctcaaaaatattaaaaataaagagcttttgcctatttat
ttttttcatggcgaagaaccctattttatggacgttgccttaaaatcatttgaaaacgat
gttttaaccgaagatgaaaaagcctttaaccaaactgtagtgtacggaaaagacaccacg
tttgcagaagtgctttctctggcgaggcagtttcccatgatgggggaccggcaagtaatc
atcgttaaagaagctcaggatattacgttgaccgaacccgaaagcaaagcgttgttggct
tatgccgaaaatccggtagaatccacggttttaattatcgcttataaatacaaaaaagca
gatgcgcggaaagcatttgtcaaaactttgacgcagaaaaagatgctgtatctaagtgaa
aaagtcaaagattacaacgttccaaagtggattgaaaacgaaatcaaaacgttgagaatt
caggcaaaacccaatattccgactttgctcgcagaatatttgggaaccgatttatcgcgg
atttccaatgaattgcagaaactcaaaatgatcttgaaagaaggcgaaattctcgacgaa
aagaagatcgaaaccaatatcggcatcagcaaagattttaatgttttcgaactcatcaaa
gcgctggggaaaaaagacgaaatcggtgccttcaaaatcgcgcattatatggggaaatca
aagacgcattccctggtgatgaccaccggaaatctgtataatttcttttcgaacctcatt
atttttcacaccatgaaagctgaatcgccacaaaaccaggcttcagtaatgggcgtcaat
ccttatttcctgaaagattttgcggaagcggcgcgtttttataatctcaaaaactgtaca
cgggctgtttctattttacgcgaaatcgacctcaaaagcaaaggactgggcgccattaat
atgactgacggcgaattgctgaaagaaatggtttacaaaattctgcatatcgaccaatac
aaagttcagacttag
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