Chryseobacterium gotjawalense: QGN23_08930
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Entry
QGN23_08930 CDS
T09471
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chrc
Chryseobacterium gotjawalense
Brite
KEGG Orthology (KO) [BR:
chrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrc03032
]
QGN23_08930 (topA)
03400 DNA repair and recombination proteins [BR:
chrc03400
]
QGN23_08930 (topA)
Enzymes [BR:
chrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QGN23_08930 (topA)
DNA replication proteins [BR:
chrc03032
]
Prokaryotic type
DNA Topoisomerases
QGN23_08930 (topA)
DNA repair and recombination proteins [BR:
chrc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QGN23_08930 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
WHF50561
LinkDB
All DBs
Position
complement(1970905..1973478)
Genome browser
AA seq
857 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGKDFEVKSSFGHIRDLPKKGMGIDLETFTPDYEVSADKK
KLVTELKAAVKKADIVWLASDEDREGEAIAWHLAQELKLKEENTRRIVFHEITKNAILKA
IENPRTIDQNLVNAQQARRILDRIVGFEMSPVLWKKVKTGLSAGRVQSVAVRLVVERELE
IRGFQPKSTFKLEGIFLNNSKQEITAKLKKDFVQEKEAEDFLNQCQNTDFKVLNVETKPG
TRTASAPFTTSTLQQEASNRLGYGVTATMRVAQRLYEEGYITYMRTDSVNLSQEAINGAK
AQILSEYGEQYSNPRNYTTKSATAQEAHEAIRPTDFSVKTIGDVQLNKLYQLIYKRTLAS
QMTNAKIEKTVIEIGDAKLPQHFEAQGEVIVFDGFLKAYGIVKAEDDDEENNEKLLPKVS
VGEALDYKKIEATEKFSRPSARYTEAGLVKKLEELGIGRPSTYAPTIQTIQNREYVDKRE
IIPQEREILKMTLGKTNLKKEVLTEKFGGDKNKFVPTDIGEVVNEFLTQNFAEILDYGFT
AKVEQDFDHIANGEEKWKDVLQGFYKDFHPRIADVEENADRANGERILGVDPKSGKNVLT
RIGRFGPMVQIGEQDDEEKPIFASLMATQNIATITLEEALELFKIPFDLNEFEGQTVTIG
VGRFGPYVKWGDAFISIPKGEDALSITQERAEEIINEKKLADAPIATYKGEPVTKGTGRF
GPFIKFQSMFINVPKRYDFENLSQSDINELIEAKLEKEANRYIQQWEAEKISIENARWGP
IVKLGKNIFKIPKNKKDEKFTAEELAEVSLEEVKNWITAQDKNAFKEKPKKAAAKKPAAK
KPVAKKAPVKKAAPKKK
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaacttagtgattgtagaatcaccggcaaaagccaaaacgattcaaaaatat
ttagggaaagattttgaggtgaaatcaagtttcggccatatccgggatctgcctaaaaaa
ggaatgggaatcgacctggaaacttttacacccgattatgaagtttctgcagataaaaag
aaactggtaaccgaactgaaagccgcagtgaaaaaagcagacattgtttggttggcttcc
gatgaagaccgggaaggggaagctatcgcctggcatctggcgcaggaattaaaattgaag
gaagaaaataccagaagaattgtctttcacgaaattacaaaaaatgcgattttaaaagcg
attgagaatcccagaacaatcgatcagaatttggtcaatgcgcagcaggccagaagaatt
ctcgacagaattgtaggttttgaaatgtcgccggtcctttggaaaaaagtaaaaaccgga
ctttccgcagggcgcgttcaatccgttgccgtgcgtttggtggtagaaagagaattggaa
ataagaggttttcaaccgaaatctacttttaaactcgaaggtatttttcttaataattct
aaacaggaaatcaccgcaaaactcaagaaagattttgtacaggaaaaagaagcagaagat
tttttaaatcaatgtcaaaatacggattttaaagttttaaatgttgagacaaaaccggga
acccgtaccgcatctgcaccttttacaacgtcaactttacagcaggaagccagtaacaga
ctaggttacggtgtaactgctacgatgagagttgctcaaagattgtacgaagaaggatat
attacttatatgagaaccgattccgtgaatctttctcaggaagcgattaacggagcaaaa
gcccagattctttctgaatatggcgaacaatattcgaatccaagaaattacaccaccaaa
tcagccacggcacaggaagctcacgaagcaatccgtccgaccgatttttcagtgaaaacg
attggtgatgtgcaattgaataaattatatcagttaatttataaaagaactttagcgtct
caaatgacgaatgctaaaatcgagaaaacagttattgaaattggggatgcaaaacttccg
cagcattttgaagcacaaggtgaagtgattgttttcgatggttttcttaaagcttatggt
attgtaaaagctgaagatgacgatgaagaaaacaacgaaaaattattgccgaaagtttct
gttggtgaagctttagattataaaaaaatagaagcgaccgagaaattttcccgtccttca
gcaagatataccgaggccggtttggttaagaaattagaagaactcggtatcggaaggccg
tcaacgtatgcgccgaccattcaaacgattcagaatcgagaatatgtggataagagagaa
atcattccacaggagcgggaaattttgaagatgactttgggaaaaaccaatcttaaaaaa
gaagtattgaccgaaaagtttggcggagataaaaataaattcgttcccactgatatcggg
gaagtagttaatgaattcctgacccagaattttgcagaaatcctcgattatggatttaca
gcaaaagtagagcaggattttgaccatatcgcaaatggcgaagaaaaatggaaagatgtt
ttacagggtttttacaaagattttcacccgagaattgctgatgtagaagaaaatgcggat
cgtgcaaacggtgaaagaattttaggagtagatccaaaatccggaaaaaatgtgttgacc
agaatcggcagatttggacccatggtgcagattggcgaacaggacgacgaggaaaaacca
attttcgcaagtttgatggcgacccagaatatcgcaaccattactttagaagaagctttg
gaactgttcaaaatcccttttgacttaaatgagttcgaaggtcaaacggtaacgattggc
gtgggaagatttgggccttatgtaaaatggggcgatgctttcatcagtattcctaaaggt
gaagacgcgctttcaataacccaggaaagagcagaagaaatcatcaatgaaaagaaactc
gccgacgcaccgattgcgacttataaaggagaaccggtcaccaaagggacaggaaggttt
ggtccttttattaaatttcaatcaatgttcatcaatgttccgaagcgctatgattttgaa
aatctgtcacaaagtgatatcaatgaattgattgaagcgaaattggaaaaagaagcgaac
cgctatattcaacagtgggaagcagaaaaaatttctatagaaaatgcgagatggggtccc
attgtaaaacttggaaaaaacatttttaaaatccctaaaaataaaaaagacgaaaaattt
acggccgaagaactggctgaagtttctttggaagaagtgaaaaactggataaccgcacag
gataaaaatgcttttaaagagaaacctaaaaaagcggctgcgaaaaaacctgctgctaaa
aagccggttgctaaaaaagctcctgtaaaaaaagcagcaccgaaaaagaaataa
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