Chryseobacterium sp. wdc7: QGN23_10515
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Entry
QGN23_10515 CDS
T09471
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
chrc
Chryseobacterium sp. wdc7
Pathway
chrc00550
Peptidoglycan biosynthesis
chrc01100
Metabolic pathways
chrc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
chrc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QGN23_10515
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QGN23_10515
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
chrc01011
]
QGN23_10515
Enzymes [BR:
chrc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
QGN23_10515
Peptidoglycan biosynthesis and degradation proteins [BR:
chrc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
QGN23_10515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WHF53143
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All DBs
Position
2296052..2298067
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AA seq
671 aa
AA seq
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MKPQFLKISIVLSLIAIIFIARLAYLQLFTDRYALNAANTSIKTEYIIPQRGVIFDRNGK
IMVGNQPAYEISFTAALLKPDFDTIDFCNLVRISKADFIKNVNAIKKEKYFSKLTPMTFM
KNLSREEIARIQEIIFKYPAFSIVSRPQRQYEVSTSGNLLGYTNEVNERELKKDSVYYLP
GDFIGKTGIEKSYENELRGVKGVQYIQKDIRLRNIGSYKNGALDKEVVTGKDIKLTIDYD
LQRMAEEMLVNKQGAIVAIDPTNGEILVLATGPDIDPNLFSGSEKTKNLYRLQMDTVYNN
RPTFDRSLQAAYPPGSTFKLLTAAAAMQMGVMDENTVFPCGGGFNYRGLRVKGHGGADPL
IPAIQVSSNCYFSYAFIAIMNKYPGDPTRGVNEWKKIMSSFGVGEFLNNDLAVGSKGRIP
TGEFYQKRSGGKKDWSSAYTMNGSIFNGMGQGDVLLTPLQMANSVAAIVNRGWYFTPHIV
KAIDGKPNPDPRFKVKHKTLVDPKYFDPIIKGMEAVVLRGTARSLKSNDFTMLAKTGTAQ
VPQGKDNSIFVLAAPADHPKIVIAAVMEHAGFGGTWAGPAAAVIAEKYLTGDLKREHLYQ
KLVNASFMPEYKRQWDVELKRKGLYKEPNKDSVNLKKVEERLRITRDNEQKKQLLYKRDS
ILQKLKNSAKR
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
ctgaaaccgcaatttttaaaaatctccattgttttatccttaattgctataatttttata
gcaaggcttgcttatttgcagttgttcacggaccggtatgcgctgaacgcggccaatacc
tcaataaaaaccgaatacattattccacagcgcggcgttatatttgaccgaaacgggaaa
atcatggttggaaaccagcctgcttatgaaatctcttttactgcagcattattaaaaccg
gacttcgataccatagatttttgcaatttggtgagaatcagcaaagccgatttcatcaaa
aatgttaatgctataaaaaaggaaaagtatttttcgaaattaactccgatgacttttatg
aagaatctaagtcgtgaggaaattgccagaatacaggaaatcattttcaaatatccggca
ttcagtattgtgtcaagacctcagcggcagtatgaagtttctacgtccggaaaccttttg
gggtatacgaatgaggtcaatgaaagagagctgaaaaaagattctgtctattatcttccg
ggagatttcatcgggaaaacgggaattgaaaaatcttatgaaaatgaacttcgcggcgta
aaaggagttcagtatattcaaaaagatatccgcttaaggaatatcggttcttataaaaat
ggagccttagacaaagaggttgttaccggtaaagacatcaagctcacgattgattacgat
ttacagcgtatggcagaagaaatgctggtcaataagcaaggtgcaatcgtggcaattgat
cccaccaacggggagattttggtgctggccacgggtccggatattgatccgaatcttttt
tcgggttctgaaaaaacaaaaaacctgtatcgcttacaaatggataccgtttataacaac
cgccctacctttgaccggtctcttcaggcagcttatccacccggatctacttttaaatta
cttactgctgccgctgctatgcaaatgggagtgatggatgaaaatacggttttcccgtgt
ggaggcggatttaactatcggggtttacgcgtaaaaggtcatggtggagctgatccatta
attccggctattcaggtctcaagcaactgttatttttcgtacgcttttattgctattatg
aataaatatccaggcgatccaacacggggcgtgaatgagtggaaaaaaataatgagcagt
ttcggtgtcggggaattccttaataatgacttagcagtaggatctaaaggaagaattccg
accggtgaattttaccagaagagaagtggtggcaaaaaagactggagttctgcctacacc
atgaatggttctatttttaatggaatgggacagggtgatgttttattaacccctttgcaa
atggcgaattctgtcgctgcaattgttaatcgaggttggtatttcacgccccatattgta
aaagcaattgacggaaaacccaatccggatccaagatttaaagtaaaacacaaaacgttg
gtagatccgaaatatttcgacccgattataaaaggaatggaagctgtggtgctgcgtgga
acagcccgaagtttaaaatccaatgattttaccatgctggcgaaaacaggaaccgcacag
gtgccccaaggaaaagacaattcaatatttgttttagcagctcctgcagatcatcctaaa
attgtaattgctgctgttatggaacacgcaggatttggtggtacctgggccggccctgca
gcagcagtcattgcagagaagtatttaaccggtgatttaaaacgggaacatctttatcaa
aaattagtgaatgcgagttttatgcctgagtacaaaagacaatgggacgtagaacttaaa
agaaaagggctttataaagagccgaataaagattccgtaaatctaaaaaaagtcgaagaa
cgcttgagaatcaccagagataatgagcagaaaaagcaactgctttataagagggattct
attctacagaaattaaaaaacagcgcaaaaagatga
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