Chryseobacterium gotjawalense: QGN23_14020
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Entry
QGN23_14020 CDS
T09471
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
chrc
Chryseobacterium gotjawalense
Pathway
chrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QGN23_14020 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chrc03019
]
QGN23_14020 (rny)
Messenger RNA biogenesis [BR:
chrc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QGN23_14020 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
FUSC
KH_2
Motif
Other DBs
NCBI-ProteinID:
WHF51523
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All DBs
Position
3070848..3072422
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AA seq
524 aa
AA seq
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MTTITIIIIGIVCLVVGAVIGMVFSKSALNTKAKFIVEDAKKNAENLIEKATVQAESIKK
EKHFQAKEKFMELKSQHDADIQSRERKMQDSEKRIKDKEQKLSDELSKTGKLEKDLDRQI
ADYSKKHEILERKQQELDAVTAQKVEILERISGYSAEDAKNELVEALKAEAKTKAQAHVQ
NIMAEAQLNAKQEAKKIVIQTIQRIGTEQAIENSVSVFNIESDEVKGRIIGREGRNIRAL
EAATGVEIIVDDTPEAILLSCFDPVRREIARLSLHRLVTDGRIHPARIEEVVDKTKKMIE
EEIIEVGKRTVIDLGVHGLHPELVKIVGRMKFRSSYGQNLLQHSREVANIAGTMAAELGL
NVKLAKRAGLLHDIGKVPEQESELPHALLGMQWAEKYGENPEVVNAIGAHHDEVEMTTLL
SPIIQVADAISGARPGARRQVLESYIQRLKDLEAAALSFDGVSSAYAIQAGRELRVMVES
GKVSDDQSAQLSYDISEKIQNELTYPGQVRVTVIRETRAVNIAR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaatcaccattattattatcggtattgtttgcttggttgtaggagcggtaatt
ggaatggttttttccaaaagtgctcttaacacgaaagcgaaattcatcgtagaagatgca
aagaaaaacgccgagaaccttatagaaaaagccaccgtacaggcagaatccattaagaaa
gaaaagcattttcaggccaaggagaaattcatggaactgaaatcgcaacatgatgcagac
attcagtccagagaaagaaaaatgcaggattctgaaaaaagaatcaaagacaaagagcaa
aaactcagcgatgaactgagcaagacaggcaaactggaaaaagacctggaccgtcaaatt
gctgactacagtaaaaaacacgaaatccttgaaagaaaacaacaggaattagacgccgtc
actgcacagaaagtagaaatcctggaaagaatctccggatattctgccgaagatgcgaag
aacgaactggtagaagctttgaaagcggaagccaaaacaaaagcgcaggctcatgttcag
aacattatggcggaagctcagcttaacgcgaaacaggaagctaaaaaaatcgttattcag
accattcagagaatcggtacagaacaggccatcgaaaattcggtttctgtattcaatatc
gaatctgatgaagttaaaggaagaattattggtagagaaggaagaaatatccgtgcttta
gaagcggctacaggagttgaaatcattgttgatgatacgccggaagccattttgctttcc
tgcttcgatccggtaagaagagagatcgcaagactttcccttcaccgtttggtaactgat
ggtcggattcaccctgcaagaattgaagaagtagttgataaaaccaaaaaaatgattgaa
gaggaaatcattgaagttggtaaaagaacagtgatcgatttaggagttcacggacttcac
cctgaactggtaaaaatcgtgggtagaatgaaattccgttcttcttacggacagaattta
ttgcagcactcgagagaagttgcgaatatcgccggaacaatggcagcagaattgggactt
aacgttaagttagcgaaaagagccggtttgcttcacgatatcggaaaagtaccggaacag
gaatcagaattgccacacgcccttttgggaatgcagtgggcagagaaatacggtgagaat
ccggaagttgtcaacgccattggggctcaccacgatgaggttgaaatgaccaccttatta
tcgccgatcattcaggttgccgatgcgatttccggagcaagaccgggcgcaagaagacag
gttttggaatcttatatccaaagactaaaagacctggaagcagcagctctaagtttcgac
ggtgtttcaagcgcatatgcaatccaggcgggtagagaacttcgggtaatggtagaaagc
ggaaaagtgagcgatgaccaatcagcacagctttcttacgatatctcagagaagattcaa
aacgaattaacttatccgggacaagttcgtgtaacggtaatccgtgaaaccagagcggtg
aatattgcgcgataa
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