Chryseobacterium gotjawalense: QGN23_14360
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Entry
QGN23_14360 CDS
T09471
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
chrc
Chryseobacterium gotjawalense
Pathway
chrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QGN23_14360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chrc03019
]
QGN23_14360
03016 Transfer RNA biogenesis [BR:
chrc03016
]
QGN23_14360
Enzymes [BR:
chrc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QGN23_14360
Messenger RNA biogenesis [BR:
chrc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QGN23_14360
Transfer RNA biogenesis [BR:
chrc03016
]
Prokaryotic type
tRNA degradation factors
QGN23_14360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
RRF
Motif
Other DBs
NCBI-ProteinID:
WHF51587
UniProt:
A0ABY8RC84
LinkDB
All DBs
Position
complement(3159745..3161994)
Genome browser
AA seq
749 aa
AA seq
DB search
MNAPQAIIEKIQLSDGREITIETGKLAKQANGAVVVRMGGTMLLATVVASKDAKPGVDFL
PLTVDYREKFYSAGKIPGNFFRREARPSDEEILTMRLVDRVLRPLFPSDFHAEVQVMISL
ISYDKECMPESLAGLAASAAIAITDIPFNGPMSEVTVARIDGKLVVNPSMENLAKADLNI
MVGATKDSIVMVEGEMEEISEQEMIEAIKFAHEEIKVQVAAQERLAERVGKSLPKREYSH
EDHNEEIREKVWAQTYDKVLDIAKTPSAKEERHDNFQAVLADFLTQYSEEELVTVTPYAK
IYFHDVEKEAMRQMILNDKIRLDGRSPETIRPIWSEVDYLPGAHGSAIFTRGETQSLTAV
TLGSVKDANMVDTVAINYDQKFFLHYNFPPFSTGEARPLRGTSRREVGHGNLAQRALAKM
IPTENPYTIRIVSDILESNGSSSMATVCAGTLALMDAGVQISKPVSGIAMGLVTDPKSGK
FTVLSDILGDEDHLGDMDFKVTGTADGITACQMDIKVVGLSMDIMEKALIQAKDGRLHIL
NELLKTLDAPRPDVKPHAPKMEVLEISKDFIGAIIGPGGKIIQQMQKDFETVIAIEEIGE
IGRIEISGVNRENINATIAAINEICFVPVVGSVYNGRVVKVMDFGAFVAIAKGTEGLLHI
SEIEWARLDKVPYNEGDQVEVKFMGYDDRKKMKLSRKVLLPRPAREERPQGDRPQNNDRP
REDRPQGDRPQRRDDRPENNGGHKPENNG
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctccacaagcaattattgaaaaaattcaattaagcgatggtagagaaatcacc
attgaaacaggaaaattagcgaaacaagctaatggtgctgtagtagtaagaatgggaggc
acgatgcttcttgcaacagttgtagccagcaaagatgccaaaccaggtgttgacttctta
cctttaacagtagattacagagagaaattttattccgcaggaaaaatcccgggaaacttt
ttcagaagagaagcaagaccatctgacgaagaaatcttaacgatgagattagttgaccgt
gttttacgtccgcttttcccgtcagatttccatgcagaagttcaggtgatgatttccctg
atctcgtatgataaagaatgtatgccggaatctttggccggattagccgcttctgctgca
atcgccattaccgacattcctttcaacggaccaatgtctgaagttaccgtagcaagaatc
gacggaaaattggttgttaacccaagtatggaaaatttagcgaaagctgatttgaatatt
atggttggtgcaactaaagattctatcgtaatggtagaaggtgaaatggaagaaatttct
gaacaggaaatgatcgaagccattaaattcgcacacgaagaaattaaagttcaggtagcc
gctcaggaaagattagccgagagagttggtaaatctcttccaaaaagagaatattctcac
gaagatcacaacgaagaaattcgtgaaaaagtttgggctcaaacttatgataaagtattg
gatattgcaaaaactccttctgccaaagaagaaagacatgataacttccaggctgtttta
gcagacttcttaactcagtattctgaggaagaattagtaacagtaacaccttacgcaaaa
atctatttccacgatgtagaaaaagaagcaatgcgccaaatgatccttaacgacaaaatt
cgtttggatggaagaagcccggaaacgattcgtccgatctggtcagaagttgattattta
ccgggagcacacggttctgcaatctttacaagaggagaaactcagtcattgactgcagta
actttaggatctgtaaaagatgcaaacatggtggataccgttgcgatcaactacgatcag
aaattcttcttacattacaacttcccaccgttctcaacgggtgaagcaagacctttaaga
ggaacttcaagaagagaagtaggtcacggaaacctggctcaaagagctttggcgaaaatg
atccctacagaaaacccttacaccatccgtatcgtttctgatattttagaatcaaacggt
tcgtcttctatggcaactgtttgtgctggaactttagcattaatggatgcaggtgttcaa
atttcaaaaccggtatccggaattgcgatgggattggtaactgatcctaaatcaggcaaa
ttcaccgtactttccgatatcttaggagacgaagatcacttaggtgacatggatttcaaa
gtaactggaactgcagacggaatcacggcttgtcagatggacattaaggttgtaggatta
tcaatggacattatggaaaaagcattaatccaggcgaaagacggaagattgcatatcctt
aatgaattattgaaaactcttgacgcaccaagaccagacgttaaaccacacgcaccaaaa
atggaagtattggaaatctccaaagacttcatcggggcgattattggacctggaggaaaa
attattcagcagatgcagaaagatttcgaaaccgttatcgcgattgaagaaattggcgaa
atcggaagaattgaaatttccggcgtgaacagagaaaacatcaacgcaacgatcgcagcg
atcaacgaaatctgtttcgttcctgtggttggaagtgtgtacaacggtagagttgtaaaa
gtaatggacttcggtgcttttgtagcaattgcaaaaggaactgaaggtttattgcatatt
tctgaaatcgaatgggcgcgtttggataaagttccttacaacgaaggcgatcaggtagaa
gtgaaattcatgggttacgatgaccgtaagaaaatgaaactttctagaaaagttttattg
ccaagaccggctcgtgaagaaagaccacaaggtgaccgacctcagaataacgacagaccg
agagaagaccgtccacaaggtgacagacctcaacgaagagatgaccgaccggaaaataac
ggcggacataagcctgaaaataacggataa
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