Chryseobacterium sp. D764: KYG33_01245
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Entry
KYG33_01245 CDS
T10717
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
chrd Chryseobacterium sp. D764
Pathway
chrd00040
Pentose and glucuronate interconversions
chrd01100
Metabolic pathways
chrd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
chrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
KYG33_01245
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KYG33_01245
Enzymes [BR:
chrd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
KYG33_01245
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pectate_lyase_5
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QXU49699
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All DBs
Position
complement(280670..281782)
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AA seq
370 aa
AA seq
DB search
MKTTFKAALLTVALSFALTGCGQEDIKTDLTENPNQLTLANKLVANAVVPLANCVAPGWA
SQNGGTTGGGTAAETTVTTYAQLKAAIENTAVKVIKVTGTITITTRLSLQDQTGKTLYGA
SGAKLVSTDQTASGSGIINIKRCNNIVIRNLIFEGPGAYDTDGWDNAILDDCRNVWIDHC
EFRDGVDGNFDIKNKSDFVTVSYTKFHYLKAPKPGGSGGTDDHRFSNLIGSSDGATADAG
KLNVTFVRCWWAPGCRERMPRVRFGKIHIVNSYFNSSVSNKCIAAGVQANICVDGNVFEN
VKEPINLMSGYTAVTVTSNNTFTNVTGNTAGSGTAFTPPYTIPMLSLSSVKSDVTTNAGA
TLGGNICNTL
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaacatttaaagctgcccttcttacggtagctctaagctttgccttgactggc
tgcgggcaggaagacatcaaaacagatttaacggaaaatccaaaccaacttactcttgca
aacaaactcgttgccaatgccgtagttcctttagcaaactgtgtagccccgggatgggct
tctcaaaatggtggaacaaccggtggtggaacagctgctgaaactactgtgactacctat
gctcagttaaaagctgcgatcgaaaacacagcggtaaaagtcattaaagtgacaggaacc
atcaccattacgactcgtctttcacttcaggatcaaacgggaaaaacactttacggggca
agcggtgcaaaattggtttctacagaccagacggcaagtggttcaggaattatcaatatt
aaaagatgcaacaatatcgttatcagaaatctgattttcgaaggtccgggagcttatgat
acagacggctgggacaatgctattttggatgactgcagaaatgtatggatcgaccattgc
gaattcagagacggtgtagacgggaattttgatattaaaaacaaatctgacttcgttacg
gtttcttatacgaaattccattacctgaaagctccgaaacctggtggttcaggaggaaca
gatgaccacagattctccaatcttatcggatcgagtgacggtgcaacagccgatgcggga
aaactgaatgtaacatttgttcgctgctggtgggctccgggatgcagagagcgtatgccg
agagtgagatttggtaaaatacatattgttaacagctatttcaacagttctgtaagcaac
aaatgtattgcagcaggagtccaggcgaatatctgtgtcgatggaaacgtatttgagaat
gtaaaagagcccattaacctgatgagcggttacacagcggttaccgttacttccaacaat
acatttaccaacgttaccggaaacacagcaggaagcggtacggcatttactccgccttat
acgatcccaatgctttctttatcttctgtaaagtctgatgtaacgaccaatgcaggcgca
actttaggaggcaatatttgcaatacgttataa
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