Chryseobacterium sp. D764: KYG33_03350
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Entry
KYG33_03350 CDS
T10717
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
chrd Chryseobacterium sp. D764
Pathway
chrd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KYG33_03350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chrd03019
]
KYG33_03350
Enzymes [BR:
chrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KYG33_03350
Messenger RNA biogenesis [BR:
chrd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KYG33_03350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Helicase_C_2
AAA_22
HEM4
CMS1
SWI2_SNF2
Utp25_C
Cas3-like_C_2
UvrD-helicase
RNase_P-MRP_p29
Motif
Other DBs
NCBI-ProteinID:
QXU50092
LinkDB
All DBs
Position
766751..767893
Genome browser
AA seq
380 aa
AA seq
DB search
MSFESLGLSHNIIRSVNKLGYLKPFPIQEQAVPVILQGKDLMGIAQTGSGKTACFVMPIL
EKLQNAEVKKDRNVQVLILVPTRELAIQIDEVFRAFTENLKREIRTMAVYGGVSINPQMK
GMFGVEVLIATPGRLLDLIDHNALSISGIQHLVIDEADKMFQLGFGEEMNKLFGMMPVVK
QTTLFSATLNDKVSEMKERLSINPTIIEIKKEEVEIDNIEQLAYHVSPENKGPFLRYLIK
EKKVEKALIFVSSTRSADNLVEKLKKNKIKAVAIHSQKSQGARKNNLEEFKVNGAQILVA
TDLLGRGIHIESLPCVINYELPRSPLDYIHRIGRTGRANEKGTAISILTDDELQHFRVIQ
KKMGRKVTLQRTEGIDLHGY
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgaatcgttaggattatcacacaatattattcgttctgttaacaaattaggg
tatttaaaaccatttccaatacaggagcaggcagttcctgttattttgcaggggaaagat
ttaatgggaattgcacagactggttccgggaaaacggcttgttttgtaatgcccatttta
gaaaaactacagaatgctgaagttaaaaaagaccgtaatgttcaggttttaatattggtt
cctacccgtgaactggctattcagattgatgaagttttcagagcttttacagaaaatctg
aagcgggagattcgtacaatggctgtttatggaggtgtttccatcaatccgcagatgaaa
ggaatgtttggggtagaagttcttattgccactcctggacgtctcttagacttaattgac
cataatgcattgagtatttcaggaattcagcatctggtgattgatgaagcggataaaatg
tttcagctgggctttggagaagaaatgaataagcttttcggaatgatgcctgtggtgaag
caaacgactttattttcagcgactttaaatgataaggtttctgaaatgaaagaacgcctg
tctatcaatcccactattattgaaattaaaaaagaagaagttgaaattgataatatcgaa
caacttgcatatcatgtttctcctgaaaataaaggtcctttccttcgttatttaattaag
gaaaaaaaggtggaaaaggctttgatctttgtttcgtctacaagatctgcagataacctg
gtggaaaagcttaaaaagaataaaattaaagcggtggctattcacagtcagaaatcgcag
ggagcccgcaagaataacctggaagagtttaaagtaaacggagcccagattttggtggca
acagacctgcttgggcgtggaattcacatcgagtcattaccatgcgtgatcaattacgaa
ttgccgcgttctcctttagattatattcaccgtatcggtagaacagggcgtgctaatgag
aaagggacagcaatcagtattctgacagatgatgaattgcagcatttcagagtaatccag
aagaaaatgggccgaaaagtaaccttacaaagaacagaaggtattgatttacatggttat
tag
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