Chryseobacterium sp. D764: KYG33_10125
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Entry
KYG33_10125 CDS
T10717
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
chrd Chryseobacterium sp. D764
Pathway
chrd02020
Two-component system
chrd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
chrd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KYG33_10125 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KYG33_10125 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chrd03021
]
KYG33_10125 (rpoN)
Transcription machinery [BR:
chrd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KYG33_10125 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
Motif
Other DBs
NCBI-ProteinID:
QXU51373
LinkDB
All DBs
Position
complement(2253738..2255201)
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AA seq
487 aa
AA seq
DB search
MLKQHLQLKLGQKLAPQQIQLMKLIQLHTLEFEEELERELEENPALEIAKEDSKEDEYSS
LEDAYKDEGTESIETDFDVNEYIYDDEPSYKTASSNYSPDDEEFDNESLLTEGQSLYDYL
TEQIHLINISDEDLKIAEYLIGNLDTDGYLRREIKSIVDDLAFSQGIYTTKEKVEDILEN
YVQKLDPSGVGARGLQECLLLQIEKKVSSDKAVSLAANILRHQFEALTNKHYNKIIQKYD
IEEEDLKDALEEISKLSPKVGGNFDTQTITINQEIIPDFVIQVKDGLVIPMLNSKNAPTL
RVSEEYKDILTTYSHDKNSSEHKQAALFIKQKLDAAKWYIDAINQRQNTLLQTITAIVKF
QKDYFITGDEKSLKPMILKDVADITGFDISTISRVVKSKYADTPNGIVYLKDLFSDSLTN
DDGEEVSTKEIKTHLQEVISKENKRKPLTDDALVVILKEQGYNIARRTIAKYREQLNIPV
ARLRKEL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacaacacttacaactcaaattaggacaaaagctggcccctcagcaaatccag
ttgatgaagcttattcaacttcatactcttgaatttgaagaggagttggagagagagtta
gaagaaaacccggctttggaaattgcgaaagaagattctaaggaagatgaatactcttcc
ctggaagatgcttataaggatgagggtacagaaagcattgaaacagatttcgacgtcaat
gaatatatctatgacgatgaaccgagctataaaactgcatccagcaactattctccggat
gatgaagaatttgacaacgaaagccttctcacagagggacagtccttatatgactatctt
acagaacagattcacctgattaatatcagtgatgaagatcttaagattgcagaatacctt
atcgggaacttagatacagacggatatcttagaagagaaatcaagtctatagttgatgat
ctggctttctcacaaggaatttacacaactaaagaaaaagttgaggatattctggagaac
tatgttcagaaactggatccatctggagtaggagcaagaggcctgcaggaatgtttattg
ctgcaaattgaaaagaaagtaagctcagataaagcagtttctttagctgccaatattttg
agacatcagtttgaagccctgacgaataagcactacaataagatcattcagaaatatgat
attgaagaagaagatctgaaagatgcactggaagaaatctcaaaattatccccgaaagta
ggagggaacttcgatacacaaacaattacaattaatcaggaaattattccggattttgta
attcaggtaaaagatggattggtgattcctatgctcaacagcaaaaatgcacctacttta
agagtttctgaagaatataaagatattctgactacttattcccatgataaaaactcatcg
gaacataagcaggctgcattatttatcaagcagaaactggatgccgcaaaatggtatata
gatgctattaatcagcgtcagaatactttattacagacgattacagccattgtaaagttc
cagaaggattatttcattaccggagacgaaaagtctctgaaaccaatgattctgaaggac
gttgctgatattacaggatttgatatctccactatttcaagggtggtaaaaagtaagtat
gcagatacacctaacgggattgtatatcttaaagacctgttttcagacagcttaacgaat
gatgatggagaggaagtttctaccaaagagatcaaaacccatcttcaggaagtaatcagt
aaagaaaacaaaagaaagccgcttactgatgatgcattagtggtaattctaaaggaacag
ggttataatattgccagaagaacgattgcgaaatatcgtgaacagctcaatattcctgtc
gcaagattaagaaaagaactttaa
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