Chryseobacterium sp. D764: KYG33_12970
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Entry
KYG33_12970 CDS
T10717
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chrd Chryseobacterium sp. D764
Brite
KEGG Orthology (KO) [BR:
chrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chrd03032
]
KYG33_12970 (topA)
03400 DNA repair and recombination proteins [BR:
chrd03400
]
KYG33_12970 (topA)
Enzymes [BR:
chrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KYG33_12970 (topA)
DNA replication proteins [BR:
chrd03032
]
Prokaryotic type
DNA Topoisomerases
KYG33_12970 (topA)
DNA repair and recombination proteins [BR:
chrd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KYG33_12970 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
QXU47712
LinkDB
All DBs
Position
complement(2865479..2868055)
Genome browser
AA seq
858 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGKDFEVKSSFGHIRDLPKKGMGIDLTTFSPDYEVSADKK
KLVTELKAAVKKADMVWLASDEDREGEAIAWHLADELKLKPENRKRIVFHEITKNAILKA
IDNPRDIDQNLVNAQQARRVLDRIVGFEMSPVLWKKVKPGLSAGRVQSVAVRLIVEREKE
IREFKPKASFKLDGIFLNKTEQEIAAKLKKDFEKEEDAEKFLEQAKTTEFKVLNVETKPG
TRSASAPFTTSTLQQEASSRLGYNVTNTMRMAQRLYEEGYITYMRTDSVNLSQEAIEGAK
KQITSEYGAEYSSPRNYTTKSASAQEAHEAIRPTDFGVKSIGDAQLNKLYQLIYRRTLAS
QMANAKIEKTVIEIGNASLRHHFEAQGEVIIFDGFLKAYGIVKTEDEDEENNDKLLPKVS
VGEVLNYKTITATEKFTRPSARYTEAGLVRKLEELGIGRPSTYAPTIQTIQNREYVDKRE
IEPHTREVIKMSLAKDKIKKVVLEEKFGGDKNKFLPTDIGEVVNDFLTDNFREILDYGFT
ARVEESFDEIASGDQKWKEMMTNFYSKFHPRIEDVEENADRATGDRLLGVDPKTGKNVHA
RIGRFGAMIQIGETDDEEKPIFASLMTGQNIATITFEEALELFKLPFDLSEVDGQPVSVG
VGRFGPYVKWGETYISIPKGEDPLSVDQKRAEEIINEKKIADAPIATYKGEPVTKGTGRF
GPFIKYKAIFVNVPKKYDFENLSQSDINELIDAKLEKEANRYIQQWEKEKISIENGRWGP
FIKFGKAMFKIPKKADDTKYEADELKELSLDEVKKWITDQDPKAFAEKKKPAVKKAATTK
KAATTAKKPAAKKPAAKK
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatttagtaatcgtagagtccccggcaaaagcaaaaactattcaaaaatat
ttaggaaaggattttgaagtgaaatccagtttcgggcatatccgggaccttcctaaaaaa
ggaatggggatagaccttactacattcagtcctgattacgaagtttccgcagacaagaag
aaattggtaaccgaattaaaggctgcagtaaagaaagccgatatggtatggctcgcttcc
gatgaggaccgcgaaggagaggctattgcatggcaccttgcggatgagctgaaattgaag
cctgaaaacagaaaaagaattgtattccatgagattaccaaaaacgccattctaaaagca
atcgacaatccgagagatatagatcagaacttagtaaatgcccagcaggcaagaagagtg
ctggacagaattgtaggttttgaaatgtcacccgttttatggaagaaagtaaaacctgga
ttatctgccggaagagtacaatctgtagcagtacgattaattgttgaaagagaaaaggag
attcgtgagtttaaaccaaaagcaagttttaaacttgacggaatttttttaaataaaaca
gagcaggaaatagctgccaaactgaaaaaagacttcgaaaaagaagaagatgcagaaaaa
tttcttgagcaggcaaaaactacagaatttaaagttctgaatgttgaaaccaagccgggt
acccgttctgcttcagctccatttacaacctccacattacagcaggaggcttcctcaaga
cttgggtataatgtaaccaataccatgcgtatggcacaaaggctgtatgaagaaggatac
attacctatatgagaacagattccgtaaacctttctcaggaagcaattgaaggagctaaa
aaacaaattacatcagaatatggagcagaatattcttctccaagaaattatactacaaaa
tctgcttccgcacaggaagctcacgaagcaatccgtcctacggattttggagtgaaaagt
ataggagatgcacagctgaataagctataccaactcatatacagaagaacactggcttct
cagatggccaatgcgaaaattgaaaagactgtgatcgaaatcgggaatgcatcattacgc
catcattttgaagcacagggagaggtgatcatatttgatggtttcctgaaagcttatggt
attgtgaagacagaagatgaagatgaggaaaacaatgataagttactgccaaaagtaagt
gtaggagaggtattgaactataaaactattaccgctactgaaaaattcacaagaccaagt
gcaagatataccgaagccggattggtgagaaagcttgaagaattagggattggaagacca
tctacttatgctccgacaattcagacgattcagaacagagaatatgtggataagagggaa
atcgagccgcatacccgtgaagtgatcaaaatgtctttagccaaggataaaatcaaaaaa
gtagttcttgaagagaaattcggaggtgataaaaataaattcttacccacagatataggt
gaagtggtaaatgatttcctgactgataactttagagaaattcttgactacggtttcacg
gcaagggtagaagaaagttttgacgaaattgcaagtggtgaccagaaatggaaagaaatg
atgacgaatttctactcaaaattccacccgagaatcgaagatgtagaagaaaatgcagac
cgtgcaacaggagacagactattaggggtagatccgaaaactggtaaaaatgttcatgca
agaatcggaagatttggagcgatgatccagatcggagaaactgatgatgaagagaaacca
atttttgcttcattaatgacaggtcagaatattgctaccattacttttgaagaggcatta
gaactattcaaacttcctttcgatttaagtgaagttgatggacagccggtttctgtaggg
gttggtagatttggaccttacgtgaaatggggagaaacttatatcagcattccaaaagga
gaagatcctctttctgtagatcagaaacgtgcagaagaaatcatcaatgaaaagaaaatt
gctgatgctccaattgccacctataaaggtgaaccggtaacgaaaggaacaggaagattc
gggccatttatcaaatacaaagctattttcgtaaatgttccaaaaaaatatgactttgaa
aatctttctcaaagcgatatcaatgaattaattgatgccaagcttgaaaaagaagccaac
cgatatatccagcagtgggaaaaagaaaaaatttccattgaaaacggaagatggggacct
ttcatcaaattcggaaaggcaatgttcaaaattccgaagaaagcagatgatacaaaatat
gaagcagatgagttgaaagagctttctttagatgaggttaaaaaatggattacagatcag
gatcctaaagcttttgcagaaaagaaaaaacctgcagttaaaaaagcagccacaactaag
aaggcagctacaacagctaaaaaacctgcggccaagaaacctgcagctaagaaataa
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