Chryseobacterium sp. D764: KYG33_16120
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Entry
KYG33_16120 CDS
T10717
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
chrd Chryseobacterium sp. D764
Pathway
chrd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KYG33_16120 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chrd03021
]
KYG33_16120 (rho)
03019 Messenger RNA biogenesis [BR:
chrd03019
]
KYG33_16120 (rho)
Transcription machinery [BR:
chrd03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KYG33_16120 (rho)
Messenger RNA biogenesis [BR:
chrd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KYG33_16120 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
AAA_25
AAA_22
AAA
Rho_N
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
QXU48305
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All DBs
Position
3549194..3551023
Genome browser
AA seq
609 aa
AA seq
DB search
MFNIETLRSKSVTELTKILKDLGVKVARTSNENDKIFAILDFQASNPKVAKDYFNATETT
SVTTEEAPADKPVKAPARKAVPKKPAAKPKTNTNTNTKAPAEEPKVEEKVPASEEVKPEE
PTAEVAAITEESAASAQAKKKRKRVSTNAGNAEVSQEKTEAPKNIESQEPAQAEEKPNNP
QQQANRPQKGHNHPQNSGNQHKNQNQNQQHQQHQNQNQNQNRHSEKAEEQHDHKKEFNFD
GLVSIEGVLEILPDNYGFLRSSDFSYISSPDDVYVSTAQIRNYGLKTGDTVKGIVRLPKE
GEKYFSLLKPTEVNGRDLAFIKDRVAFEYLTPLFPEEKFNLAGSGSTISTRIVDLFAPIG
KGQRAMIVAQPKTGKTMLLKDIANSIAANHPEVYMMVLLIDERPEEVTDMERSVNAEVIA
STFDEAAEKHVKVANLVLAKAQRMVECGHDVVILLDSITRLARAYNTVTPASGKVLSGGV
DANALHKPKRFFGAARKIEGGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMELQLDRKI
ANRRIYPAIDLISSSTRRDDLLLDEVTSQRMWIFRKYLSEMNPVEAMEFVNKNIKGTLNN
EEFLMSMNK
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacatagaaacgttaaggtcaaaatccgtaacggaactgactaaaatcttaaaa
gatttgggcgttaaagttgcaagaaccagcaatgaaaatgacaagatctttgctattctt
gactttcaggcttctaaccctaaagttgcaaaagattatttcaacgccacagaaaccacc
agtgtaactactgaagaggccccagcagataaacctgttaaagccccggcaagaaaagct
gttccgaagaaaccagcagccaagccaaaaacaaatacaaacacaaatacaaaagctccg
gcagaagaacctaaagtagaagaaaaggtacccgcttctgaagaagtaaaaccggaagaa
cccacagctgaagtagctgcaataacagaggaatctgcagcaagcgcccaggctaaaaag
aaaagaaaaagagtttctaccaatgcaggtaatgcagaagtatctcaggaaaaaacagaa
gctccaaaaaacatagaatctcaagagccagctcaggctgaagaaaagcctaacaatcct
caacaacaggctaacagacctcaaaaaggacacaaccatccacagaatagtggaaaccaa
cataaaaatcaaaaccagaaccaacaacaccagcagcatcaaaaccaaaatcagaatcaa
aacagacattctgaaaaggcagaggagcagcacgaccataaaaaagaattcaatttcgat
ggattggtaagcattgaaggtgttttggaaattttaccggataactacggatttttacgt
tcatcagacttcagctatatctcttctccagatgatgtgtatgtatctacagcacagatc
agaaattatggtttaaaaaccggagataccgttaaaggaattgtaagacttccaaaagaa
ggtgaaaaatatttttcattattaaaacctacagaagttaacggacgtgaccttgcattt
atcaaggaccgtgttgcttttgaatatcttactccgcttttcccggaagaaaaattcaat
ttagcaggaagcggatctaccatttctaccagaattgtagatttatttgcacctattgga
aaaggtcagagagcaatgatcgttgcacagcctaaaacaggtaagacgatgttgcttaaa
gatattgctaattctattgcagccaaccacccggaagtatacatgatggttcttttgatt
gatgagcgtccggaagaggttactgatatggaaagaagtgtaaatgcagaagttattgcc
tctacatttgacgaagcagctgaaaaacatgtgaaagtagctaaccttgttcttgcgaaa
gcacagagaatggttgagtgtggacacgatgtagtaatcttactggattctattacaaga
ttggcaagagcatacaacacagttactcctgcatcaggtaaggttctttccggtggggta
gacgccaatgcacttcacaagccgaaaagattctttggagcagcaagaaaaatcgaagga
ggaggatctctgacgatcattgcaaccgcattgattgatacaggatctaaaatggatgaa
gtaatctttgaagaattcaaaggtactggtaacatggagcttcagctagacagaaaaatt
gctaacagaagaatttatcctgctattgacttaatttcttccagtacccgtagagatgat
cttcttcttgatgaagtgacttctcagagaatgtggatcttcagaaaatatctttctgaa
atgaatcctgtagaagctatggaatttgtaaataagaacatcaaaggaactctcaacaat
gaagaattcctgatgtctatgaataaataa
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