Chryseobacterium sp. D764: KYG33_20340
Help
Entry
KYG33_20340 CDS
T10717
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
chrd Chryseobacterium sp. D764
Pathway
chrd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KYG33_20340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chrd03019
]
KYG33_20340
03009 Ribosome biogenesis [BR:
chrd03009
]
KYG33_20340
Enzymes [BR:
chrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KYG33_20340
Messenger RNA biogenesis [BR:
chrd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KYG33_20340
Ribosome biogenesis [BR:
chrd03009
]
Prokaryotic type
rRNA helicases
KYG33_20340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QXU49073
LinkDB
All DBs
Position
4463013..4464725
Genome browser
AA seq
570 aa
AA seq
DB search
MNLFTETNLSPDILKAIGELGYESPTEIQKQTIPFILSDIRDLIALAQTGTGKTAAFSLP
ILDMIDDTSRKIQLLVLCPTRELCLQISKDIKNYSKYMKDIKTTAVYGGSSIVDQMRSLK
DKPQIIVGTPGRVIDLINRKALDFSAIHWLVLDEADEMLSMGFKDELETILSETPETKQT
FLFSATMNKEVERISKNYLTKPHRISVGSINEVKKNITHEYYVVGYRQKKEALKRLIDAN
PNQYSIIFCRTRMETQEVADFLMQNGYAADALHGDLSQAQRDTVMKKFRLKNIDILVATD
VAARGLDVNSLTHVIHFSLPDDPEVFVHRSGRTGRAGKDGISMALIKPEESRKLKQIKSA
TKIEINEKFIPTGEDIIKAQVGGVFEKLLTEHEDLFEFDDSLIPDLSKFTKEELVHQLLQ
FQLKDLALYYKDKHDLAEQKFSSRDDDYSRRDRGRDRDRDRGRDRENSRDRDRGGRDRDR
GGKPRRRDENMVRFFFNLGKKDQLKKLDVLDIINKATGDGKSKKRAEIGDIEILEKFSFF
EVEKSFKDNVLSNIQSMKFKGKDMRAEVAN
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatttacggaaaccaatttaagtcctgatatccttaaggcaattggcgaactg
ggctacgaaagcccaacagaaatccaaaaacagactatcccttttattctttcagatatt
cgcgacttgatcgcacttgcgcaaacagggacaggcaagacagcagcgttttcgcttccg
attttggatatgattgacgatacgagtcgcaaaatccaattattggtgctttgtccgaca
cgggaattatgtcttcagatttcgaaggacataaagaattactctaagtacatgaaagac
atcaaaactactgcagtttatggtggaagtagtattgtagatcagatgagatctttgaag
gataaaccacagattattgtgggaactccgggaagagtaattgatcttatcaacagaaag
gcattagacttttctgcgattcattggttagtattagacgaagctgatgaaatgctttct
atgggattcaaagacgaattggaaaccattctaagcgaaactccggaaactaaacaaact
ttcttattctctgcaacgatgaataaagaggtggaaagaatttccaaaaattaccttaca
aaaccacaccgtatttcagtaggttctatcaacgaagtgaagaagaacattactcacgaa
tactatgtagtagggtaccgtcagaaaaaagaagcgttgaagagattgatcgatgctaat
cctaatcagtactccattatcttctgtagaacgagaatggaaactcaggaggtagcagat
ttcttaatgcagaacggttatgcagctgatgctcttcatggtgatctttctcaggcgcag
agagatacggtaatgaagaaattcagattgaaaaacattgatattcttgtagcgacagac
gttgcagcaagaggattggatgtaaactctcttacacacgttattcacttctctttacca
gatgatcctgaagtattcgttcacagaagcggaagaacaggtagagctggaaaagacggt
atttctatggctttgataaagcctgaagaaagcagaaaactgaaacagatcaaatctgca
acaaaaattgaaatcaacgaaaaattcattcctacaggtgaagatattatcaaagctcag
gtaggaggtgtattcgaaaaattattgacggagcacgaggatcttttcgaatttgatgat
agcttaattcctgatctaagcaaatttacaaaagaagaattggtgcaccagctgctacag
tttcaattgaaggatcttgctttatattacaaagataaacacgatcttgctgagcagaag
tttagcagcagagatgacgattactcaagaagagaccgtggacgtgatagagacagagat
agaggccgtgacagagaaaacagccgagacagagatcgcggtggaagagacagagatcgt
ggtggaaagccaagaagaagagatgagaatatggtaagattcttctttaatcttggaaaa
aaagaccagttgaagaagcttgatgttttggatattatcaataaggctacaggtgatgga
aaatccaagaaaagagctgagattggagatatcgaaatcttagaaaaattctctttcttt
gaggttgaaaaatcgtttaaggacaatgtcttgagcaatattcaatcaatgaagttcaaa
ggaaaagatatgagagctgaagttgcaaactaa
DBGET
integrated database retrieval system
