KEGG   Chryseoglobus sp. 28M-23: IE160_00870
Entry
IE160_00870       CDS       T06824                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
chre  Chryseoglobus sp. 28M-23
Brite
KEGG Orthology (KO) [BR:chre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:chre03400]
    IE160_00870
Enzymes [BR:chre01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     IE160_00870
    5.6.2.6  RNA 3'-5' helicase
     IE160_00870
DNA repair and recombination proteins [BR:chre03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    IE160_00870
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr WH4_Lhr DEAD WH2_Lhr Helicase_C ResIII DUF6406
Other DBs
NCBI-ProteinID: QOD93827
UniProt: A0A7L8D746
LinkDB
Position
complement(168229..172854)
AA seq 1541 aa
MTDPEPDDVLGRFAPATREWFTGAFPAATPAQLGAWEAISTGRHALVVAPTGSGKTLAAF
LSSIDRLVATPSQRSATATEGGSRTTVLYVSPLKALGVDVERNLRAPLIGVERTAARLGV
DVPPITVGVRSGDTPTQERRALQKNPPDILITTPESLYLMLTSSARETLDGVTTVIVDEV
HAVAGTKRGAHLALSLERLDARLARPAQRIGLSATVRPVEEVARFLGGAAPVTIVKPPAA
KTFDLTISVPVDDMTAPGSLVPVEEEGSTSGVAPPPSIWPHVEEDIVERVLARRSTIVFV
NSRRLAERLTARLNEIYAEQLAGEPSPPTAPPASMMAQAGATGGAEPLLARAHHGSVSKD
QRADIEDDLKSGRLRCVVATSSLELGIDMGAVDLVIQVEAPPSVASGLQRIGRAGHQVGE
VSTGVLMPKHRLDVLHATVTSERMVSGLIEELRIPQNPLDVLAQQTVAHVALEPCEVEEW
FDTVRRSAPFAGLPRSAFDAALDLLSGRFPSDRFAELRPRIVWDRVRGELSGRPGAQRLA
VTSGGTIPDRGLYGVFLPGEGAGRRVGELDEEMVYESRVGDVISLGATSWRIDEITHDRV
VVTPAFGQPGKVPFWRGDGLGRPAELGRALGTATRELGAATAEGRRERLVAAGLDDRAIL
NLDALLAEQAASTGHLPTDETLVVERFRDELGDWRLVLHSPYGLAVHAPWALAVSARIRE
RHGFDGAAIAADDGIVVRLPDTESEPPGAELFLFEKDELDELVTVEVGGSAMFASRFREC
AARALLLPRRNPSQRSPLWQQRQRASQLLEVAREFPAFPIILETVREVLGDVYDLPSLTQ
LTDRIRQRSVRLVEVETPTPSPFARSLLFGYVAAFLYEGDSPLAERRAAALSIDSTLLAE
LLGRAELREVLDPTVILQTEAELQRLAPDRRARDAEGVVDLLRLLGPLSLEELVERAGVE
LAAEPPGRAEVVSGWLHELGRANRVLSVSIAGVSRYAIVEDAARLRDALGTPVPIGVPTA
FLESVPDPIGDLVARHARSHGPFVAQDVAHRFGLGIAVVTDALRRLAGERRVLEGEFRPG
ASGTEWVDVEVLRRLRTRSLAALRSEIEPVSAGTLGRFLPSWQNVGSTLRGLDGVLQAVE
QLQGAALPASAWETLVLPSRVRDYSPAWLDELTAAGELVWAGEGSLAGNDGWLSLHLPET
APLSLHDPAPTEPTLSQEAILAALSSGGAYFFRQLSDVVNSQDGLDRVDDAALADDLWQL
VWAGLLTNDTLAPVRAMLGATRQRASTPRRAPRSRSYRGYARPASVSRTGPPIAAGRWSL
LPDRDGDATRRAAHLADTLLERHGVITRGAAQAEEVVGGFALLYRVLSRMEEAGRVRRGY
FVEHLGAAQFATPATVDRVRAHSRDPDAAPALRAVVLAASDPANPYGAALPWPAVQIDSA
DSARGASPGHRAGRKAGAIVLLVDGHLAVYLERGGKSALTFTDDAAVLEAAAAELAAVVR
ARLRSVRVERVNSQSVFGTPLADALTAAGFVATPQGLRLRV
NT seq 4626 nt   +upstreamnt  +downstreamnt
atgaccgaccccgagcctgacgacgtactcggtcgcttcgcgccggccacgcgcgagtgg
ttcaccggagctttcccggcggcgactccggcgcagctgggcgcgtgggaggcgatctcg
accgggcgccacgcgctcgtcgtcgcaccgaccgggtcgggcaagacactcgcggctttc
ctctcgtcgatcgaccgtcttgtcgcgaccccctcgcagcgctcggcgacggcgaccgag
ggcggctcccgcacgaccgtgctgtacgtgagcccgctcaaggcgctcggcgtagacgtg
gagcgcaacctgcgtgccccgctcatcggggtcgagcgcacggcagcacggctcggggtc
gacgtgccaccgatcaccgtcggggtgcggtcgggcgacacccccacgcaggagcgtcgc
gccctgcagaagaacccgccagacatcctcatcacgaccccggagagcctgtacctcatg
ctcacctcgagcgcccgcgagacgctcgacggcgtcacgacggtcatcgtcgacgaggtg
cacgcggtcgccggaaccaagcgcggcgcgcacctcgcgctgagcctcgagcggctcgat
gcccgcttggcgcgccccgcgcagcgcatcggcctctcggcgacagtgcggcccgtcgag
gaggtcgcacggttcctcggcggggccgccccggtcacgatcgtgaagccgccggccgcc
aagaccttcgatctgacgatctcggtgcctgtcgacgacatgactgcacccggctcgctc
gtgcccgtcgaggaggaggggtcgacctcgggcgtggcaccgccgccgtcgatctggccg
cacgtggaggaggacatcgtcgagcgcgtgctcgcgcgccggtccacgatcgtcttcgtg
aactcccgccgcctggccgagaggctcacggcccggctcaatgagatctacgcggagcaa
ctcgctggcgaaccgtcgcccccgacggcgccaccggcctcgatgatggctcaagccggc
gcgacaggaggcgccgagcccctcctcgcccgcgcgcatcacggctcggtgagcaaggac
cagcgggccgacatcgaggacgacctgaagtcgggccgcctgcgctgcgtcgtcgcgacg
agcagcctcgagctcggcatcgacatgggagcggtcgacctcgtcatccaggtggaggca
cctcccagcgtggcgagcgggctccagcgcatcggccgcgccggccaccaggtcggagag
gtctccacgggcgtgctcatgcccaagcaccggctggacgtgctgcacgcgaccgtcacg
agcgagcgcatggtgagcggcctcatcgaagagctccgcattccgcagaacccgctcgac
gtgctcgcccagcagacggtcgcccacgtggcgctcgaaccgtgcgaggtcgaggagtgg
ttcgacacggtgcggcgcagtgctccgttcgccggcctgccgcgctcggccttcgacgcc
gcgctcgacctgctgagcggccgattcccgagcgaccgcttcgcggagctgcggccgcgc
atcgtgtgggatcgcgtacgaggcgagctcagcggtcgacccggtgctcagcgcctcgcc
gtcacgagcggcggcaccattcccgaccgcggcctctacggggtcttcctgcccggcgag
ggagccggtcgtcgcgtgggcgagctcgacgaggagatggtctacgagtcgcgggtcggc
gacgtcatctcccttggggcgacgagctggcgcatcgacgagatcacgcacgaccgcgtc
gtcgtcacgcccgcgttcgggcagcccggcaaggtgccgttctggcgcggggacggcctg
gggcggccggcggagctcgggcgcgcgctcggcaccgcgacgcgcgagctgggcgcggcg
accgcggagggtcgccgggagcgcctcgtcgccgcgggtctcgacgaccgcgccatcctc
aatctggatgctctgctcgccgagcaggccgcctccaccggtcacctgccgaccgacgag
actcttgtcgtcgagaggtttcgcgatgagctcggcgactggcggctcgtcctgcactcg
ccctacggcctcgcggtgcacgcgccctgggccctcgccgtgtcggcgcgcatccgcgag
cgccacggcttcgatggcgcggcgatcgccgccgacgacggcatcgtggtgcggctgccc
gacacggagagcgagccgccgggcgccgagctcttcctgttcgagaaggacgagctcgac
gagctcgtgacggtcgaggtggggggctcggcgatgttcgcgagccggttccgcgagtgc
gccgcgcgcgccctgctgctgccgcggcgcaacccgagccagcgcagcccgctctggcag
cagcggcagcgtgcgagccagctgctcgaggtcgcccgcgagtttcccgccttcccgatc
attctcgagaccgtgcgggaggttctcggcgacgtctacgatctgcccagcctcacgcaa
ctcaccgatcgtatccgccagcgatcggtgcgcctcgtcgaggtggagacgccgacgcct
tcccccttcgcgcgctccctcctcttcggctatgtcgccgccttcctctacgagggcgac
agcccgctcgccgagcgtcgagctgcggcgctcagcatcgactcgaccctcctcgccgag
ctgctcggccgcgcggagctgcgggaggtgctcgacccgacggtcatcctgcagaccgag
gccgagctgcagcgcttggctcccgatcgccgggctcgcgatgcggagggcgtggtcgac
ctgcttcgcctcctcgggccgctctcgctcgaggagctcgtcgagcgcgcaggcgtcgag
ctcgcggccgagccgcccggccgcgccgaagtcgtctcgggctggctgcacgagctgggt
cgcgcgaaccgcgtcctctcggtgtcgatcgcgggggtgtcccgctacgcgatcgtcgag
gacgccgcgaggctgcgcgacgccctcggcacccccgtgccgatcggtgtgccgaccgcg
ttcctggagagcgtgcccgacccgatcggcgacctcgtcgcgcgccacgcgcgcagccac
ggcccgttcgtcgcacaggacgtcgcgcaccgcttcgggctcggcatcgcggtggtgacg
gatgccctgcgccggctcgccggcgagcggcgtgtgctcgagggcgagttccgcccgggc
gcgagcggcacagagtgggtcgacgtcgaggtgctgcggcggctgcgcacgcgaagcctc
gcggccctgcgctcggagatcgagcccgtgagcgcgggcacactggggcgcttcctcccc
tcgtggcagaacgtgggcagcacgctgcgcgggctcgacggcgtgctgcaggcggtcgag
cagctgcagggcgcggctctgcccgcgagtgcatgggagaccctggttctgccgagccgt
gtgcgcgactactcccccgcctggctcgacgagctcaccgccgcgggcgagctcgtctgg
gcgggagagggctccctcgccggcaacgacggctggctgagcctgcacctgcccgagacg
gcgccgctgagcctgcacgaccccgcaccgaccgagccgaccctgtcgcaggaggcgatc
ctcgccgcgctctcgagcggtggcgcctacttcttccgccagctctccgacgtcgtgaac
agccaggacggcctcgaccgcgtcgacgatgccgccctggccgatgatctctggcagctc
gtgtgggccggcctgctgacgaacgacacgctcgcgcccgtacgggcgatgctcggtgcc
acgcgccagcgggcgagcactcctcggcgcgcaccgcgctcacgcagctatcgcgggtac
gcgcgcccggcctccgtctctcggacggggccgccgatcgcggcgggccggtggtcgctg
ctgcccgaccgtgatggggacgcgactcggcgagcagcgcatctcgccgacaccctcctg
gaacggcatggcgtcatcacgcgcggtgccgcgcaggcggaggaggtcgtgggaggcttc
gcgctgctgtatcgcgtgctcagccgaatggaggaggccggccgggtgcgccgcggctac
ttcgtcgagcacctcggggccgcccagttcgccacgccggcgaccgtcgaccgggtgcgc
gcgcactcgcgcgaccccgatgccgccccggcgctgcgcgccgtagtgctcgccgcgagc
gacccggccaacccctacggcgctgcgctgccctggccggccgtccagatcgactcggcc
gactccgcacggggagcctcgccgggtcaccgcgcgggccgcaaggcgggggcgatcgtc
ctgctcgtggacgggcacctcgccgtctacctggagcgcggcggcaagagcgccctgacg
ttcacggacgacgccgccgtgctcgaggccgccgccgctgagctcgccgccgtcgtgcgt
gcccgactgcgcagcgtgcgggtggagcgggtcaactcgcagagcgtgttcggcacacct
ctcgccgacgccctgaccgccgcgggcttcgtcgccacgccgcagggcctgaggctcagg
gtctga

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