Chryseoglobus sp. 28M-23: IE160_01180
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Entry
IE160_01180 CDS
T06824
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
chre
Chryseoglobus sp. 28M-23
Pathway
chre03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
chre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IE160_01180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chre03021
]
IE160_01180
03400 DNA repair and recombination proteins [BR:
chre03400
]
IE160_01180
Enzymes [BR:
chre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IE160_01180
Transcription machinery [BR:
chre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IE160_01180
DNA repair and recombination proteins [BR:
chre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IE160_01180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
AMIN-like
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QOD93885
UniProt:
A0A7L8D417
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All DBs
Position
233076..234071
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AA seq
331 aa
AA seq
DB search
MLIAQRPTLTEESVSDFRSRFMIEPLEPGFGYTLGNSMRRTLLSSIPGAAVTSIRIDGVL
HEFSTIAGVKEDVTEIILNIKNLVVSSEHDEPITAYLRKQGAGEVTAADISAPAGVEIHN
PELVIATLNDSAKFELELTIERGRGYVSATQNRSEFSEAGQIPIDSIYSPVLKVTYRVEA
TRAGERTDFDRLVVDVETKSAITPRDAIASAGRTLVELFGLARELNTQAEGIEIGPAPVD
AVLSTELSMPIEDLDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVKDK
LVEMGLSLKDAVPGFDGAHFYGGFDDDEQSS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcacagcgtcccaccctcaccgaggagagcgtttccgacttccgctcgcgg
ttcatgatcgagccgctcgagcccggtttcggatacacgctcggaaactcgatgcgtcga
accctcctctcgtcgattcccggagcggccgtcacgagcattcgcatcgacggcgtgctg
cacgagttcagcaccatcgcgggtgtcaaggaggatgtcaccgagatcatcctcaacatc
aagaacctcgtcgtctcgagcgagcacgacgagcccatcacggcgtacctgcgcaagcag
ggcgctggcgaggtgacggcggccgacatctccgcacccgcgggggtcgagatccacaac
cccgagctcgtcatcgcgacgctcaacgacagcgccaagttcgagctggagctgacgatc
gagcgcggtcgcggctacgtgagcgccacgcagaaccgcagcgagttcagcgaggcgggg
cagatcccgatcgactcgatctactcgcccgtcctcaaggtgacctaccgcgtcgaggcg
acccgtgccggggagcgcaccgacttcgaccgtctcgtcgtcgacgtcgagacgaagtcg
gccatcacgccgcgcgatgcgatcgcgtcggccggccgcacgctcgtcgagctgttcggc
ctggcccgcgagctcaacacgcaggccgagggcatcgagatcggccctgcgccggtcgac
gcggtgctctccaccgagctgagcatgcccatcgaagacctcgatctgtcggtgcgcagc
tacaactgcctcaagcgcgagggcatcaacaccgtgagcgagctcgtcgccctgtcggag
acgcagctcatgaacatccgcaacttcgggcagaagtcggtcgacgaggtcaaggacaag
ctcgtcgagatgggcctctcgctcaaggacgccgttcccggcttcgacggcgcgcacttc
tacggcggcttcgacgacgacgagcagtcgagctag
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